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Inbook Reference Les restes d'animaux
Located in Library / RBINS Staff Publications 2021
Inproceedings Reference Large old tropical trees as keystone biodiversity structures: the Life on Trees program
Association for Tropical Biology and Conservation annual meeting https://www.atbc2024.org Large old tropical trees as keystone biodiversity structures: the Life on Trees program Leponce Maurice1, Basset Yves2, Aristizábal-Botero Ángela1, Albán Castillo Joaquina3, Aguilar Rengifo Guillermo4, Barbut Jérôme5, Buyck Bart5, Butterill Phil6, Calders Kim7, Carrias Jean-François8, Catchpole Damien9, D’hont Barbara7, Delabie Jacques10, Drescher Jochen11, Ertz Damien12, Heughebaert André13, Hofstetter Valérie14, Leroy Céline15, Leveque Antoine16, Macedo Cuenca Victor4, Melki Frédéric17, Michaux Johan18, Ocupa Horna Luis19, Pillaca Huacre Luis3, Poirier Eddy20, Ramage Thibault21, Rougerie Rodolphe5, Rouhan Germinal5, Rufray Vincent17, Salas Guererro Marcos4, Scheu Stefan11, Schmidl Jürgen22, Silva Dávila Diana3, Valenzuela Gamarra Luis23, Vanderpoorten Alain18, Villemant Claire5, Youdjou Nabil1, Pascal Olivier17 1 Royal Belgian Institute of Natural Sciences, Vautier st. 29, Brussels, 1000, Belgium; 2 Smithsonian Tropical Research Institute, Panama; 3 Museo de Historia Natural, Universidad Nacional Mayor de San Marcos, Lima, Peru; 4 Servicio Nacional de Áreas Naturales Protegidas por el Estado, Ministerio del Ambiente, Peru; 5 Muséum national d'Histoire naturelle, Paris, France; 6 Biology Centre, Czech Academy of Sciences, České Budějovice,Czech Republic; 7 Ghent University, Belgium; 8 Université Clermont-Auvergne, Clermont-Ferrand, France; 9 Independent Consultant, Lima, Peru; 10 Centro de Pesquisas do Cacau – CEPEC, Itabuna, Brasil; 11 Göttingen University, Germany; 12 Meise Botanic Garden, Belgium; 13 Belgian Biodiversity Platform, Brussels, Belgium; 14 AGROSCOPE, Nyon, Switzerland; 15 AMAP (Univ. Montpellier, CIRAD, CNRS, INRAE, IRD), Montpellier, France; 16 PatriNat (OFB-CNRS-MNHN), Paris, France; 17 Fonds de Dotation Biotope Pour La Nature, Mèze, France; 18 Université de Liège, Belgique; 19 Centro de Investigación en Biología Tropical y Conservación, Piura, Perú ; 20 Independent entomologist, Cayenne, Guyane ; 21 Independent entomologist, Concarneau, France ; 22 Universität Erlangen-Nürnberg, Germany. ; 22 Jardín Botánico de Missouri, Peru E-mail: (presenting author): mleponce@naturalsciences.be The aim of the Life on Trees (LOT, www.lifeontrees.org) program is to generate baseline knowledge about the number of eukaryotic species that a single large mature tropical tree can host and to understand how these communities of organisms are assembled. The program is being undertaken in the Andean Amazon biodiversity hotspot. Our first project, LOT01 in the Andean foothills in 2022, located at 400m a.s.l., involved the study of a spectacular Dussia tessmannii tree (Fabaceae), towering at 50 meters in height and 45m wide. Our second project, LOT02 in the Andes in 2023, at 2450m a.s.l., focused on a 32-meter-tall Ficus americana subsp. andicola. Surveys were carried out by professional climbers, guided by experts of the different eukaryotic groups studied (plants, fungi, animals, protists). To better understand the contribution of different tree components (bark, leaves, fruits, flowers, living and dead wood) to overall tree biodiversity, we partitioned observations into communities based on vertical strata or microhabitat and will examine similarities and nestedness in the composition of these communities. Initial findings indicate that significant diversity is harbored by the individual tree at both locations (e.g., LOT01 vs LOT02: 42 vs 114 orchid species, 28 vs 28 fern species, 200+ vs 300+ bryophyte species, and 180 vs 100+ lichen species identified). These figures set world records for their respective elevations. This confirms that large old tropical trees are important pools of biodiversity, probably related to the variety of local microhabitats and tree age.
Located in Library / RBINS Staff Publications 2023
Article Reference Unveiling the above-ground eukaryotic diversity supported by individual large old trees : the “Life on Trees” integrative protocol
Large tropical trees are rightly perceived as supporting a plethora of organisms. However, baseline data about the variety of taxa coexisting on single large tropical trees are lacking and prevent a full understanding of both the magnitude of biodiversity and the complexity of interactions among organisms in tropical rainforests. The two main aims of the research program “Life on Trees” (LOT) are (1) to establish baseline knowledge on the number of eukaryote species supported/hosted by the above-ground part of a single tropical tree and (2) to understand how these communities of organisms are assembled and distributed on or inside the tree. To achieve the first goal, we integrated a set of 36 methods for comprehensively sampling eukaryotes (plants, fungi, animals, protists) present on a tropical tree. The resulting LOT protocol was conceived and implemented during projects in the Andean Amazon region and is proposed here as a guideline for future projects of a similar nature. To address the second objective, we evaluated the microclimatic differences between tree zones and tested state-of-the-art terrestrial laser scanning (TLS) and positioning technologies incorporating satellite and fixed base station signals (dGNSS). A marked variation in temperature and relative humidity was detected along a 6-zones Johansson scheme, a tree structure subdivision system commonly used to study the stratification of epiphytic plants. Samples were collected from these six zones, including three along the trunk and three in the canopy. To better understand how different tree components (e.g., bark, leaves, fruits, flowers, dead wood) contribute to overall tree biodiversity, we categorized observations into communities based on Johansson zones and microhabitats. TLS was an essential aid in understanding the complex tree architecture. By contrast, the accuracy of positioning samples in the tree with dGNSS was low. Comprehensively sampling the biota of individual trees offers an alternative to assessing the biodiversity of fewer groups of organisms at the forest scale. Large old tropical trees provide a wealth of microhabitats that encompass a wide range of ecological conditions, thereby capturing a broad spectrum of biodiversity.
Located in Library / RBINS Staff Publications 2023
Article Reference Contribution of omnidirectional flight traps to assess the ant (Hymenoptera: Formicidae) diversity in an agroforestry system.
Located in Library / RBINS Staff Publications 2023
Inproceedings Reference Canopy laser scanning to study the complex architecture of large old trees
Canopy laser scanning to study the complex architecture of large old trees Barbara D'hont1 , Professor Kim Calders1 , Professor Alexandre Antonelli6 , Dr. Thomas Berg7 , Dr. Karun Dayal1 , Dr. Leonard Hambrecht5 , Dr. Maurice Leponce2,3, Prof. Arko Lucieer5 , Olivier Pascal4 , Professor Pasi Raumonen8, Professor Hans Verbeeck1 1Q-ForestLab, Department of Environment, Ghent University, Ghent, Belgium, 2Royal Belgian Institute of Natural Sciences, Brussels, Belgium, 3Université Libre de Bruxelles, Brussels, Belgium, 4Fonds de Dotation Biotope Pour La Nature, France, 5School of Geography, Planning, and Spatial Sciences, University of Tasmania, , Australia, 6Royal Botanic Gardens, Kew, Richmond, Surrey, United Kingdom, 7ARAÇÁ Project, Nova Friburgo, Rio de Janeiro, Brazil, 8Faculty of Information Technology and Communication Sciences, Tampere University, Tampere, Finland Large trees are keystone structures providing multiple ecosystem functions in forests all around the world: they disproportionately contribute to forest biomass and biodiversity. Large trees can have an extremely complex structure, housing many epiphytes on their stem and branches. High point-density 3D point clouds, in which leaves and epiphytes in the tree can be distinguished, are useful to make the link between the distribution of organisms on the tree, the tree architecture and its microclimate. In addition, a comprehensive branching model can improve above ground biomass (AGB) estimates. Highly detailed, complete point clouds of large trees are, however, exceptionally difficult to derive. With terrestrial laser scanning, the state-of-the-art method to capture 3D tree structure, the plant material blocks the view of (or, occludes) the top part of the dense crown. Drone or airborne laser scanning data on the other hand, lacks detail in the subcanopy. Combining these two methods minimises occlusion; however, increased distance from the tree to the scanner still leads to a relatively low resolution of the canopy point clouds. To improve the level of precision of the tree point clouds, we introduce a new concept, called canopy laser scanning (CLS). With CLS, a laser scanner is operated statically inside the tree canopy, reducing the distance between the area of interest and the instrument. We lifted a high-end laser scanner (RIEGL vz-400(i)) inside the canopy of six large emergent trees. Four of these trees are located in different types of tropical rainforests in Colombia, Brazil and Peru. They are part of biodiversity programs in which organisms and their spatial distributions are studied (Life On Trees, Araçá). The two other trees are famous giants located in the wet temperate eucalypt forests of southern Tasmania. We will present the practical aspects of CLS, evaluate the extra value of using canopy scans, looking at occlusion and point cloud precision, estimate epiphyte cover and AGB. We demonstrate that canopy laser scanning opens up new opportunities in sciences in which multi-disciplinary teams perform in depth research on large individual trees.
Located in Library / RBINS Staff Publications 2023
Book Reference Bedforms as Benthic Habitats: Living
on the Edge, Chaos, Order and Complexity
Bedforms as benthic habitats are studied increasingly as acquisition and analysis of acoustic data improve in capturing, visualizing and quantifying terrain variables on various scales. However, feedback mechanisms between geomorphology and benthos are not always clear and complexity increases where humans also affect the benthos-landscape relationship. Based on research-oriented seabed mapping along the Belgian part of the North Sea (BPNS), a synthesis is provided on where increased biodiversity has been observed in relation to active bedforms.
Located in Library / RBINS Staff Publications 2017
Book Reference Building a 4D Voxel-Based Decision Support System for a Sustainable Management of Marine Geological Resources
For sustainable management of marine geological resources, a geological knowledge base is being built for the Belgian and southern Netherlands part of the North Sea. Voxel models of the subsurface are used for predictions on sand and gravel quantities and qualities, to ensure long-term resource use. The voxels are filled with geological data from boreholes and seismic lines, but other information can be added also. The geology provides boundary conditions needed to run environmental impact models that calculate resource depletion and regeneration under various scenarios of aggregate extraction. Such analyses are important in monitoring progress towards good environmental status, as outlined in the Marine Strategy Framework Directive. By including uncertainty, data products can be generated with confidence limits, which is critical for assessing the significance of changes in the habitat or in any other resource-relevant parameter. All of the information is integrated into a cross-domain, multi-criteria decision support system optimised for user-friendliness and online visualisation.
Located in Library / RBINS Staff Publications 2017
Article Reference Cryptic diversity and ecosystem functioning: a complex tale of differential effects on decomposition
Marine ecosystems are experiencing accelerating population and species loss. Some ecosystem functions are decreasing and there is growing interest in the link between biodiversity and ecosystem functioning. The role of cryptic (morphologically identical but genetically distinct) species in this biodiversity-ecosystem functioning link is unclear and has not yet been formally tested. We tested if there is a differential effect of four cryptic species of the bacterivorous nematode Litoditis marina on the decomposition process of macroalgae. Bacterivorous nematodes can stimulate or slow down bacterial activity and modify the bacterial assemblage composition. Moreover, we tested if interspecific interactions among the four cryptic species influence the decomposition process. A laboratory experiment with both mono- and multispecific nematode cultures was conducted, and loss of organic matter and the activity of two key extracellular enzymes for the degradation of phytodetritus were assessed. L. marina mainly influenced qualitative aspects of the decomposition process rather than its overall rate: an effect of the nematodes on the enzymatic activities became manifest, although no clear nematode effect on bulk organic matter weight loss was found. We also demonstrated that species-specific effects on the decomposition process existed. Combining the four cryptic species resulted in high competition, with one dominant species, but without complete exclusion of other species. These interspecific interactions translated into different effects on the decomposition process. The species-specific differences indicated that each cryptic species may play an important and distinct role in ecosystem functioning. Functional differences may result in coexistence among very similar species.
Located in Library / RBINS Staff Publications 2016
Article Reference Active dispersal is differentially affected by inter- and intraspecific competition in closely related nematode species (vol 124, pg 561, 2016)
Located in Library / RBINS Staff Publications 2016
Article Reference Bostryx hennahi (Gray, 1828) the largest Chilean bulimulid (Mollusca: Pulmonata) rediscovered among Tillandsia communities in northern Chile
Located in Library / RBINS Staff Publications 2016