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Article Reference High-amplitude lake-level changes in tectonically active Lake Issyk-Kul (Kyrgyzstan) revealed by high-resolution seismic reflection data
A total of 84 seismic profiles, mainly from the western and eastern deltas of Lake Issyk-Kul, were used to identify lake-level changes. Seven stratigraphic sequences were reconstructed, each containing a series of delta lobes that were formed during former lake-level stillstands or during slow lake-level increase or decrease. The lake level has experienced at least four cycles of stepwise rise and fall of 400202fm or more. These fluctuations were mainly caused by past changes in the atmospheric circulation pattern. During periods of low lake levels, the Siberian High was likely to be strong, bringing dry air masses from the Mongolian steppe blocking the midlatitude Westerlies. During periods of high lake levels, the Siberian High must have been weaker or displaced, and the midlatitude Westerlies could bring moister air masses from the Mediterranean and North Atlantic regions.
Located in Library / RBINS Staff Publications 2017
Article Reference High-Latitude Dinosaur Nesting Strategies during the Latest Cretaceous in North-Eastern Russia
Located in Library / RBINS Staff Publications 2023
Article Reference High-resolution facies analysis of a coastal sabkha in the eastern Gulf of Salwa (Qatar): A spatio-temporal reconstruction.
Located in Library / RBINS Staff Publications 2022
Inproceedings Reference High-throughput sequencing of PCR amplicons: a test to barcode a bee species complex (Hymenoptera: Apoidea: Halictidae) and survey Wolbachia infections
Located in Library / RBINS Staff Publications
Article Reference Highly polymorphic mitochondrial DNA and deceiving haplotypic differentiation: implications for assessing population genetic differentiation and connectivity
Background Hyperdiverse mtDNA with more than 5% of variable synonymous nucleotide sites can lead to erroneous interpretations of population genetic differentiation patterns and parameters (φST, DEST). We illustrate this by using hyperdiverse mtDNA markers to infer population genetic differentiation and connectivity in Melarhaphe neritoides, a NE Atlantic (NEA) gastropod with a high dispersal potential. We also provide a recent literature example of how mtDNA hyperdiversity may have misguided the interpretation of genetic connectivity in the crab Opecarcinus hypostegus. Results mtDNA variation surveyed throughout the NEA showed that nearly all M. neritoides specimens had haplotypes private to populations, suggesting at first glance a lack of gene flow and thus a strong population genetic differentiation. Yet, the bush-like haplotype network, though visually misleading, showed no signs of phylogeographic or other haplotype structuring. Coalescent-based gene flow estimates were high throughout the NEA, irrespective of whether or not mtDNA hyperdiversity was reduced by removing hypervariable sites. Conclusions Melarhaphe neritoides seems to be panmictic over the entire NEA, which is consistent with its long-lived pelagic larval stage. With hyperdiverse mtDNA, the apparent lack of shared haplotypes among populations does not necessarily reflect a lack of gene flow and/or population genetic differentiation by fixation of alternative haplotypes (DEST ≈ 1 does not a fortiori imply φST ≈ 1), but may be due to (1) a too low sampling effort to detect shared haplotypes and/or (2) a very high mutation rate that may conceal the signal of gene flow. Hyperdiverse mtDNA can be used to assess connectivity by coalescent-based methods. Yet, the combined use of φST and DEST can provide a reasonable inference of connectivity patterns from hyperdiverse mtDNA, too.
Located in Library / RBINS Staff Publications 2019
Article Reference Historical biogeography, systematics, and integrative taxonomy of the non‑Ethiopian speckled pelage brush‑furred rats (Lophuromys flavopunctatus group)
Located in Library / RBINS Staff Publications 2021
Article Reference Historical DNA metabarcoding of the prey and microbiome of trematomid fishes using museum samples.
Located in Library / RBINS Staff Publications 2018
Article Reference Historical management of equine resources in France from the Iron Age to the Modern Period
Alongside horses, donkeys and their first-generation hybrids represent members of the Equidae family known for their social, economic and symbolic importance in protohistoric and historical France. However, their relative importance and their respective roles in different regions and time periods are difficult to assess based on textual, iconographic and archaeological evidence. This is both due to incomplete, partial and scattered historical sources and difficulties to accurately assign fragmentary archaeological remains at the proper taxonomic level. DNA- based methods, however, allow for a robust identification of the taxonomic status of ancient equine osseous material from minimal sequence data. Here, we leveraged shallow ancient DNA sequencing and the dedicated Zonkey computational pipeline to obtain the first baseline distribution for horses, mules and donkeys in France from the Iron Age to the Modern period. Our collection includes a total of 873 ancient specimens spanning 128 ubiquitous and the most dominant species identified, our dataset reveals the importance of mule breeding during Roman times, especially between the 1st and 3rd centuries CE (Common Era), where they represented between 20.0% and 34.2% of equine assemblages. In contrast, donkeys were almost absent from northern France as-semblages during the whole Roman period, but replaced mules in rural and urban commercial and economic centers from the early Middle Ages. Our work also identified donkeys of exceptional size during Late Antiquity, which calls for a deep reassessment of the true morphological space of past equine species. This study confirmed the general preference toward horses throughout all time periods investigated but revealed dynamic manage-ment strategies leveraging the whole breadth of equine resources in various social, geographic and temporal contexts.
Located in Library / RBINS Staff Publications 2021
Article Reference Holarctic genetic structure and range dynamics in the woolly mammoth
Ancient DNA analyses have provided enhanced resolution of population histories in many Pleistocene taxa. However, most studies are spatially restricted, making inference of species-level biogeographic histories difficult. Here, we analyse mitochondrial DNA (mtDNA) variation in the woolly mammoth from across its Holarctic range to reconstruct its history over the last 200 thousand years (kyr).We identify a previously undocumented major mtDNA lineage in Europe, which was replaced by another major mtDNA lineage 32–34 kyr before present (BP). Coalescent simulations provide support for demographic expansions at approximately 121 kyr BP, suggesting that the previous interglacial was an important driver for demography and intraspecific genetic divergence. Furthermore, our results suggest an expansion into Eurasia fromAmerica around 66 kyr BP, coinciding with the first exposure of the Bering Land Bridge during the Late Pleistocene. Bayesian inference indicates Late Pleistocene demographic stability until 20–15 kyr BP, when a severe population size decline occurred.
Located in Library / RBINS Staff Publications
Article Reference Holy Smoke in Medieval Funerary Rites: Chemical Fingerprints of Frankincense in Southern Belgian Incense Burners
Located in Library / RBINS Staff Publications