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Article Reference Age of mud breccia from mud volcanoes in Academician Ridge, Lake Baikal
Lake Baikal is the only freshwater reservoir on Earth with gas-hydrate accumulations in its bottom sediments, partly due to the activity of mud volcanoes. This paper describes a group of mud volcanoes recently discovered on the slope of the Academician Ridge between the northern and central Lake Baikal basins. Our analysis of diatom skeletons in the mud breccia sampled from the study area shows a high abundance of Cyclotella iris et var. These extinct species were also discovered in a core sample from BDP-98 borehole. Based on the biostratigraphic and seis-mostratigraphic correlations, the age of the mud breccia in the studied mud volcanoes ranges from the Late Miocene to the Early Pliocene (4.6 to 5.6 Ma). The correlations suggest that the material originated from a depth of less than 310 m below the lake bottom.
Located in Library / RBINS Staff Publications 2017
Article Reference High-amplitude lake-level changes in tectonically active Lake Issyk-Kul (Kyrgyzstan) revealed by high-resolution seismic reflection data
A total of 84 seismic profiles, mainly from the western and eastern deltas of Lake Issyk-Kul, were used to identify lake-level changes. Seven stratigraphic sequences were reconstructed, each containing a series of delta lobes that were formed during former lake-level stillstands or during slow lake-level increase or decrease. The lake level has experienced at least four cycles of stepwise rise and fall of 400202fm or more. These fluctuations were mainly caused by past changes in the atmospheric circulation pattern. During periods of low lake levels, the Siberian High was likely to be strong, bringing dry air masses from the Mongolian steppe blocking the midlatitude Westerlies. During periods of high lake levels, the Siberian High must have been weaker or displaced, and the midlatitude Westerlies could bring moister air masses from the Mediterranean and North Atlantic regions.
Located in Library / RBINS Staff Publications 2017
Article Reference Letters to the twenty-first century botanist. Second series:“what is a seed?”–3. How did we get there? Palaeobotany sheds light on the emergence of seed
This paper discusses the main steps leading to the acquisition, during the Palaeozoic, of the seed habit. The earliest spermatophytes originated in the Late Devonian and produced small cupulate ovules characterized by an elaborated sporangial apex involved in pollination. The diversification of ovules during the Carboniferous led to a wider range of sizes and shapes, and an increasing importance of the integument. The earliest seeds containing embryos are reported in Carboniferous coniferophytes.
Located in Library / RBINS Staff Publications 2018
Article Reference Weather and climate related spatial varability of high turbidity areas in the North Sea and the English Channel
Located in Library / Pending old publications
Article Reference Limits of calcium isotopes diagenesis in fossil bone and enamel
Diagenesis has been recognized for decades to significantly alter the trace elements biogenic signatures in fossil tooth enamel and bone that are routinely used for paleobiological and paleoenvironmental reconstructions. This signature is modified during diagenesis according to a complex continuum between two main processes, addition and substitution. For an additive-like, or early diagenesis, the trace elements biogenic profiles can be restored by leaching secondary minerals, but this technique is inefficient for a substitutive-like, or extensive diagenesis for which secondary trace elements are incorporated into the biogenic mineral. This scheme is however unclear for Ca, the major cation in tooth enamel and bone hydroxylapatite, whose stable isotope composition (δ44/42Ca) also conveys biological and environmental information. We present a suite of leaching experiments for monitoring δ44/42Ca values in artificial and natural fossil enamel and bone from different settings. The results show that enamel δ44/42Ca values are insensitive to an additive-like diagenesis that involves the formation of secondary Ca- carbonate mineral phases, while bone shows a consistent offset toward 44Ca-enriched values, that can be restored to the biogenic baseline by a leaching procedure. In the context of a substitutive-like diagenesis, bone exhibits constant δ44/42Ca values, insensitive to leaching, and shows a REE pattern symptomatic of extensive diagenesis. Such a REE pattern can be observed in fossil enamel for which δ44/42Ca values are still fluctuating and follow a trophic pattern. We conclude that Ca isotopes in fossil enamel are probably not prone to extensive diagenesis and argue that this immunity is due to the very low porosity of enamel that cannot accommodate enough secondary minerals to significantly modify the isotopic composition of the enamel Ca pool.
Located in Library / RBINS Staff Publications 2023
Article Reference Taxonomic Revision of the Genus Trictenotoma Gray, 1832 (Coleoptera: Trictenotomidae). Part 3 – Species from the Philippine Archipelago, with Description of a New Species
Located in Library / RBINS Staff Publications 2021
Article Reference Food nutrient availability affects epibiont prevalence and richness in natural Daphnia populations
Located in Library / RBINS Staff Publications 2020
Article Reference Quality-control tests for OC4, OC5 and NIR-red satellite chlorophyll-a algorithms applied to coastal waters
Reliable satellite estimates of chlorophyll-a concentration (Chl-a) are needed in coastal waters for applications such as eutrophication monitoring. However, because of the optical complexity of coastal waters, retrieving accurate Chl-a is still challenging. Many algorithms exist and give quite different performance for different optical conditions but there is no clear definition of the limits of applicability of each algorithm and no clear basis for deciding which algorithm to apply to any given image pixel (reflectance spectrum). Poor quality satellite Chl-a data can easily reach end-users. To remedy this and provide a clear decision on when a specific Chl-a algorithm can be used, we propose simple quality control tests, based on MERIS water leaving reflectance (ρw) bands, to determine on a pixel-by-pixel basis if any of three popular and complementary algorithms can be used. The algorithms being tested are: 1. the OC4 blue-green band ratio algorithm which was designed for open ocean waters; 2. the OC5 algorithm which is based on look-up tables and corrects OC4 overestimation in moderately turbid waters and 3. a near infrared-red (NIR-red) band ratio algorithm designed for eutrophic waters. Using a dataset of 348 in situ Chl-a / MERIS matchups, the conditions for reliable performance of each of the selected algorithms are determined. The approach proposed here looks for the best compromise between the minimization of the relative difference between In situ measurements and satellite estimations and the number of pixels processed. Conditions for a reliable application of OC4 and OC5 depend on ρw412/ρw443 and ρw560, used as proxies of coloured dissolved organic matter and suspended particulate matter (SPM), as compared to ρw560/ρw490, used as a proxy for Chl-a. Conditions for reliable application of the NIR-red band ratio algorithm depend on Chl-a and SPM. These conditions are translated into pixel-based quality control (QC) tests with appropriately chosen thresholds. Results show that by removing data which do not pass QC, the performance of the three selected algorithms is significantly improved. After combining these algorithms, 70\% of the dataset could be processed with a median absolute percent difference of 30.5\%. The QC tests and algorithm merging methodology were then tested on four MERIS images of European waters. The OC5 algorithm was found to be suitable for most pixels, except in very turbid and eutrophic waters along the coasts where the NIR-red band ratio algorithm helps to fill the gap. Finally, a test was performed on an OLCI-S3A image. Although some validations of water reflectance are still needed for the OLCI sensors, results show similar behavior to the MERIS applications which suggests that when applied to OLCI data the present methodology will help to accurately estimate Chl-a in coastal waters for the next decade.
Located in Library / RBINS Staff Publications 2022
Article Reference Monitoring of high biomass Phaeocystis globosa blooms in the Southern North Sea by in situ and future spaceborne hyperspectral radiometry
Phaeocystis globosa (P. globosa hereafter) is a phytoplankton species which commonly blooms at high biomass in April–May in the Southern North Sea and forms undesirable foam which accumulates on the beaches. Monitoring of this species is required by EU directives. Measurement of phytoplankton species composition has historically been made by pigment or microscopic analysis of water samples, which is spatially sparse and temporally infrequent e.g. weekly/monthly. In-water instruments such as flow cytometers can provide very high frequency data but at high acquisition and maintenance cost. Automated in situ above water radiometry has the potential to provide very high frequency data at single locations but requires very careful design of processing algorithms in turbid waters with high non-algal absorption. Spaceborne radiometry could provide both very good spatial coverage and moderate/high frequency of data, e.g. daily/weekly, but accurate determination of phytoplankton species composition is considerably more difficult in turbid waters than in open ocean waters. Prior studies based on a limited number of shipborne reflectance measurements suggested feasibility of P. globosa detection in turbid waters from hyperspectral radiometry. The availability of a new autonomous above water hyperspectral radiometer system has enabled further refinement and intensive testing of these techniques. From a time-series of 4356 water reflectance spectra measured near Ostend harbour in Belgian coastal waters from 2020/04/01 to 2020/08/18, two existing algorithms for P. globosa detection were successfully applied. Results show a high biomass P. globosa bloom occurring in late-April/early-May as found every year in water sample analyses for Belgian coastal waters. The high temporal resolution of the radiometric data allows to capture the evolution of the bloom at time scales sufficiently short (hourly and daily) compared to growth/decay and tidal processes. The challenges of extending the methods to future spaceborne instruments are also tested by simulating the impact of errors in sensor inter-band calibration, atmospheric correction and radiometric noise. Results show that because of their spectral coherence, atmospheric correction errors impact only slightly P. globosa detection whereas inaccuracy in inter-band calibration and radiometric noise are much more problematic as they affect each spectral band independently. Because radiometric noise should be reduced in the new generation of hyperspectral sensors and can always be reduced by spatial binning, the inter-band relative calibration uncertainty appears to be the main challenge for spaceborne mission design. Indeed, it was demonstrated that inter-band calibration error should be 0.25\% and ideally 0.1\% at top of the atmosphere highlighting the need for particular attention to inter-band calibration in sensor design and post processing treatments including vicarious calibration.
Located in Library / RBINS Staff Publications 2022
Article Reference Using Hyperspectral Remote Sensing to Monitor Water Quality in Drinking Water Reservoirs
At the Blankaart Water Production Center, a reservoir containing 3 million m3 of raw surface water acts as a first biologic treatment step before further processing to drinking water. Over the past decade, severe algal blooms have occurred in the reservoir, hampering the water production. Therefore, strategies (e.g., the injection of algaecide) have been looked at to prevent these from happening or try to control them. In this context, the HYperspectral Pointable System for Terrestrial and Aquatic Radiometry (HYPSTAR), installed since early 2021, helps in monitoring the effectiveness of these strategies. Indeed, the HYPSTAR provides, at a very high temporal resolution, bio-optical parameters related to the water quality, i.e., Chlorophyll-a (Chla) concentrations and suspended particulate matter (SPM). The present paper shows how the raw in situ hyperspectral data (a total of 8116 spectra recorded between 2021-02-03 and 2022-08-03, of which 2988 spectra passed the quality check) are processed to find the water-leaving reflectance and how SPM and Chla are derived from it. Based on a limited number of validation data, we also discuss the potential of retrieving phycocyanin (an accessory pigment unique to freshwater cyanobacteria). The results show the benefits of the high temporal resolution of the HYPSTAR to provide near real-time water quality indicators. The study confirms that, in conjunction with a few water sampling data used for validation, the HYPSTAR can be used as a quick and cost-effective method to detect and monitor phytoplankton blooms.
Located in Library / RBINS Staff Publications 2022