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Assembling ancestors: the manipulation of Neolithic and Gallo-Roman skeletal remains at Pommerœul, Belgium
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RBINS Staff Publications 2024
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Assessing Nummulites geochemistry as a proxy for early Eocene palaeotemperature evolution in the North Sea Basin
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RBINS Staff Publications 2022
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Barcoding and traditional health practitioner perspectives are informative to monitor and conserve frogs and reptiles traded for traditional medicine in urban South Africa
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Previous literature suggests that Indigenous cultural practices, specifically traditional medicine, are commonplace among urban communities contrary to the general conception that such practices are restricted to rural societies. We reviewed previous literature for records of herptiles (frog and reptile species) sold by traditional health practitioners in urban South Africa, then used visual confirmation surveys, DNA barcoding and folk taxonomy to identify the herptile species that were on sale. Additionally, we interviewed 11 IsiZulu and SePedi speaking traditional health practitioners to document details of the collection and pricing of herptile specimens along with the practitioners' views of current conservation measures for traditional medicine markets. The 34 herptile species recorded in previous literature on traditional medicine markets included endangered and non-native species. Spectrophotometry measurements of the DNA we extracted from the tissue of herptiles used in traditional medicine were an unreliable predictor of whether those extractions would be suitable for further experimental work. From our initial set of 111 tissue samples, 81 sequencing reactions were successful and 55 of those sequences had species-level matches to COI reference sequences on the NCBI GenBank and/or BOLD databases. Molecular identification revealed that traditional health practitioners correctly labelled 77% of the samples that we successfully identified with DNA barcoding in this study. Our mixed methodology approach is useful for conservation planning as it updates knowledge of animal use in Indigenous remedies and can accurately identify species of high conservation priority. Furthermore, this study highlights the possibility of collaborative conservation planning with traditional health practitioners.
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RBINS Staff Publications 2023 OA
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Biodiversity of the freshwater crabs of Benin: a genetic approach
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RBINS Staff Publications 2024
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Bioerosional marks in the shells of two extinct sea turtle taxa from the Eocene of Belgium
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Bioerosional marks are frequently recognized as indicators of the dynamic interactions between the organisms and their surrounding environments. In the fossil record, these structures are frequently manifest in the skeletal remains of vertebrates, being commonly associated to predation activity, scavenging, or post-mortem degradation processes. In the case of the turtles, their shells offer a distinctive substrate, exposed for the development of bioerosional processes throughout the organism life, unlike other vertebrate osseous structures. These bioerosions can indicate the type of habitat in which the turtles live, their behavioral patterns, and even their state of health. Sea turtles, as other marine vertebrates, have been extensively studied in the realms of the biology, evolution, and conservation. However, relatively scarce information is available regarding the pathologies and infectious diseases affecting their shells, especially when extinct taxa are analyzed. The aim of this study is to analyze the diverse types of bioerosional marks on the shells of two sea turtle individuals, attributable to taxa, from the Lutetian (middle Eocene) of Belgium. One of them corresponds to the shell of the holotype of Eochelone brabantica (IRSNB R 0001). Its carapace exhibits multiple erosive anomalies on several costal plates. The second specimen is a carapace of Puppigerus camperi (IRSNB R 0004). It displays different typologies of shell deviations, also of erosive character. The analyses of these specimens have been performed through both the detailed macroscopic examination and the study of the cross-sectional images provided by CT scanning in the case of Eochelone brabantica, and a 3D model obtained through a surface scanner for Puppigerus camperi. As a result, insights into the shell modifications of these two turtle individuals induced by various external agents have been provided, enhancing our understanding of the physical stressors affecting these organisms in ancient marine environments and the organisms responsible for these changes.
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RBINS Staff Publications 2025
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Biofluorescence in Morelia, Malayopython and Python: first reports for the Pythonidae
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Ultraviolet (UV) induced biofluorescence in snakes has been underexplored compared to lizards. This study reports for the first time UV fluorescence in several Pythonidae species, including Morelia viridis, Malayopython reticulatus, and Python regius. Specimens were examined under both white and UV light, revealing that UV fluorescence in these snakes is likely skin-based, induced by chemical compounds rather than bone-based as seen in other reptiles. Notably, Morelia viridis and M. azurea exhibited a golden mustard yellow fluorescence, while Malayopython reticulatus displayed a complex pattern with intense yellow fluorescence. The study also found that UV fluorescence is absent in ethanol-preserved specimens, suggesting the degradation of fluorescent compounds during preservation. These findings contribute to the understanding of UV fluorescence in snakes and highlight the need for further research on its functional significance and the specific molecules involved.
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RBINS Staff Publications 2024
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Biofluorescence of the Crocodile Skinks, genus Tribolonotus: first report in Scincidae
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Biofluorescence, the phenomenon where organisms absorb short wavelengths of light and re-emit longer wavelengths, has been documented in various reptile and amphibian groups. This study reports the first observation of UV-induced biofluorescence in the genus Tribolonotus (crocodile skinks), marking the first such report for the family Scincidae. Specimens of Tribolonotus novaeguineae, T. brongersmai, and T. gracilis were examined under UV light, revealing distinct fluorescence patterns. The fluorescence is primarily bone-induced, linked to the presence of osteoderms, although some skin-based fluorescence was also observed, particularly around the eyes. The study suggests potential ecological roles for this fluorescence, such as intraspecific signaling or predator-prey interactions, and highlights the need for further research to understand the functional significance of biofluorescence in these skinks.
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RBINS Staff Publications 2024
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BIRDIE: A data pipeline to inform wetland and waterbird conservation at multiple scales
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Introduction: Efforts to collect ecological data have intensified over the last decade. This is especially true for freshwater habitats, which are among the most impacted by human activity and yet lagging behind in terms of data availability. Now, to support conservation programmes and management decisions, these data need to be analyzed and interpreted; a process that can be complex and time consuming. The South African Biodiversity Data Pipeline for Wetlands and Waterbirds (BIRDIE) aims to help fast and efficient information uptake, bridging the gap between raw ecological datasets and the information final users need. <br /><br /> Methods: BIRDIE is a full data pipeline that takes up raw data, and estimates indicators related to waterbird populations, while keeping track of their associated uncertainty. At present, we focus on the assessment of species abundance and distribution in South Africa using two citizen-science bird monitoring datasets, namely: the African Bird Atlas Project and the Coordinated Waterbird Counts. These data are analyzed with occupancy and state-space models, respectively. In addition, a suite of environmental layers help contextualize waterbird population indicators, and link these to the ecological condition of the supporting wetlands. Both data and estimated indicators are accessible to end users through an online portal and web services. <br /><br /> Results and discussion: We have designed a modular system that includes tasks, such as: data cleaning, statistical analysis, diagnostics, and computation of indicators. Envisioned users of BIRDIE include government officials, conservation managers, researchers and the general public, all of whom have been engaged throughout the project. Acknowledging that conservation programmes run at multiple spatial and temporal scales, we have developed a granular framework in which indicators are estimated at small scales, and then these are aggregated to compute similar indicators at broader scales. Thus, the online portal is designed to provide spatial and temporal visualization of the indicators using maps, time series and pre-compiled reports for species, sites and conservation programmes. In the future, we aim to expand the geographical coverage of the pipeline to other African countries, and develop more indicators specific to the ecological structure and function of wetlands.
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RBINS Staff Publications 2023
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BopCo: an identification service for species of policy concern, and its role in the Belgian speciesid.be consortium
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RBINS Staff Publications 2024
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BOPCO: An identification service for species of policy concern, including invasive alien species
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Located in
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RBINS Staff Publications 2024