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Article Reference chemical/x-molconn-Z Regional differences in vertebral shape along the axial skeleton in caecilians (Amphibia: Gymnophiona)
Abstract Caecilians are elongate, limbless and annulated amphibians that, as far as is known, all have an at least partly fossorial lifestyle. It has been suggested that elongate limbless vertebrates show little morphological differentiation throughout the postcranial skeleton. However, relatively few studies have explored the axial skeleton in limbless tetrapods. In this study, we used ?CT data and three-dimensional geometric morphometrics to explore regional differences in vertebral shape across a broad range of caecilian species. Our results highlight substantial differences in vertebral shape along the axial skeleton, with anterior vertebrae being short and bulky, whereas posterior vertebrae are more elongated. This study shows that despite being limbless, elongate tetrapods such as caecilians still show regional heterogeneity in the shape of individual vertebrae along the vertebral column. Further studies are needed, however, to understand the possible causes and functional consequences of the observed variation in vertebral shape in caecilians.
Located in Library / RBINS Staff Publications 2022
Article Reference C source code Regional environmental pressure influences population differentiation in turbot (Scophthalmus maximus).
Unravelling the factors shaping the genetic structure of mobile marine species is challenging due to the high potential for gene flow. However, genetic inference can be greatly enhanced by increasing the genomic, geographical or environmental resolution of population genetic studies. Here, we investigated the population structure of turbot (Scophthalmus maximus) by screening 17 random and gene-linked markers in 999 individuals at 290 geographical locations throughout the northeast Atlantic Ocean. A seascape genetics approach with the inclusion of high-resolution oceanographical data was used to quantify the association of genetic variation with spatial, temporal and environmental parameters. Neutral loci identified three subgroups: an Atlantic group, a Baltic Sea group and one on the Irish Shelf. The inclusion of loci putatively under selection suggested an additional break in the North Sea, subdividing southern from northern Atlantic individuals. Environmental and spatial seascape variables correlated marginally with neutral genetic variation, but explained significant proportions (respectively, 8.7% and 10.3%) of adaptive genetic variation. Environmental variables associated with outlier allele frequencies included salinity, temperature, bottom shear stress, dissolved oxygen concentration and depth of the pycnocline. Furthermore, levels of explained adaptive genetic variation differed markedly between basins (3% vs. 12% in the North and Baltic Sea, respectively). We suggest that stable environmental selection pressure contributes to relatively strong local adaptation in the Baltic Sea. Our seascape genetic approach using a large number of sampling locations and associated oceanographical data proved useful for the identification of population units as the basis of management decisions.
Located in Library / RBINS Staff Publications
Inbook Reference Regionalisering - Régionalisation
Located in Library / RBINS Staff Publications 2022
Article Reference Relation between mitochondrial DNA hyperdiversity, mutation rate and mitochondrial genome evolution in Melarhaphe neritoides (Gastropoda: Littorinidae) and other Caenogastropoda
Mitochondrial DNA hyperdiversity is primarily caused by high mutation rates (µ) and has potential implications for mitogenome architecture and evolution. In the hyperdiverse mtDNA of Melarhaphe neritoides (Gastropoda: Littorinidae), high mutational pressure generates unusually large amounts of synonymous variation, which is expected to (1) promote changes in synonymous codon usage, (2) reflect selection at synonymous sites, (3) increase mtDNA recombination and gene rearrangement, and (4) be correlated with high mtDNA substitution rates. The mitogenome of M. neritoides was sequenced, compared to closely related littorinids and put in the phylogenetic context of Caenogastropoda, to assess the influence of mtDNA hyperdiversity and high µ on gene content and gene order. Most mitogenome features are in line with the trend in Mollusca, except for the atypical secondary structure of the methionine transfer RNA lacking the TΨC-loop. Therefore, mtDNA hyperdiversity and high µ in M. neritoides do not seem to affect its mitogenome architecture. Synonymous sites are under positive selection, which adds to the growing evidence of non-neutral evolution at synonymous sites. Under such non-neutrality, substitution rate involves neutral and non-neutral substitutions, and high µ is not necessarily associated with high substitution rate, thus explaining that, unlike high µ, a high substitution rate is associated with gene order rearrangement.
Located in Library / RBINS Staff Publications 2018
Article Reference Relationships of Late Pleistocene giant deer as revealed by Sinomegaceros mitogenomes from East Asia
Located in Library / RBINS Staff Publications 2023
Article Reference Reliability of AMS 14C dates of moss temper preserved in Neolithic pottery from the Scheldt river valley (Belgium).
Located in Library / RBINS Staff Publications 2019
Article Reference Reliable DNA barcoding performance proved for species and island populations of Comoran squamate reptiles
Located in Library / RBINS Staff Publications
Article Reference Remains of Atsinganosaurus from the Late Cretaceous Site of Velaux-La Bastide Neuve (Southern France)
Located in Library / RBINS Staff Publications 2017
Inbook Reference Remains of traded fish in archaeological sites : indicators of status or bulk food ?
The presence on archaeological sites of fish species that have been imported from distant areas has often been regarded as an indicator of high status. Typical examples include the Spanish mackerel (Scomber japonicus) and the fish sauces found at Roman sites from Middle and Western Europe, or the Nilotic fish found at Chalcolithic to Crusader period sites in the Eastern Mediterranean area. The available evidence in the literature for trade in those species is reviewed and also the herring trade in medieval Europe is discussed. The factors that have an influence on the price of those traded food items include the quality of the fish products, production costs and transport, but are difficult to evaluate. It appears moreover that the number of sites with exotic fish is growing rapidly now that better recovery techniques are used and the quality of the reference collections used during study is improving. Traded fish seem to turn up in numerous settlement types of varying status, thus showing that caution is needed when using these remains as indicators of high purchasing power.
Located in Library / RBINS Staff Publications
Article Reference Remarks on Hymenoptera on urban green roofs in Belgium
In this paper we discuss all Hymenoptera (10.085 specimens) caught on several urban green roofs in Belgium during 2020 and 2021. We thereby try to connect species’ ecology and the specific habitat of extensive green roofs. Based on these findings we suggest what life communities can indeed be expected there. Six species on 120 taxa discovered are first reported for Belgium: Gonatopus lunatus (var. bifasciatus) Klug, 1810 (Aculeata: Dryinidae); Synacra paupera Macek, 1995 (Parasitica: Diapriidae); Alysia lucicola Haliday, 1838, Idiasta dichrocera Konigsmann, 1960 and Leiophron deficiens (Ruthe, 1856) (Parasitica: Braconidae) and Gelis declivis Forster, 1850 (Parasitica: Ichneumonidae).
Located in Library / RBINS Staff Publications 2023 OA