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Article Reference Organ- and species-specific accumulation of metals in two land snail species (Gastropoda, Pulmonata)
Located in Library / RBINS Staff Publications
Article Reference Organic carbon accumulation and productivity over the past 130 years in Lake Kawaguchi (central Japan) reconstructed using organic geochemical proxies.
Located in Library / RBINS Staff Publications 2020
Article Reference Organic Matter Composition of Biomineral flocs and Its Influence on Suspended Particulate Matter Dynamics Along a Nearshore to Offshore Transect
The seasonal variation in concentration of transparent exopolymer particles (TEPs), particulate organic carbon (POC) and particulate organic nitrogen (PON) were investigated together with floc size and the concentration of suspended particulate matter (SPM) along the cross-shore gradient, from the high turbid nearshore toward the low-turbid offshore waters in the Southern Bight of the North Sea. Our data demonstrate that biophysical flocculation cannot be explained by these heterogeneous parameters, but requires a distinction between a more reactive labile (“fresh”) and a less reactive refractory (“mineral-associated”) fraction. Based on all data, we separated the labile and mineral-associated POC, PON, and TEP using a semi-empirical model approach. The model's estimates of fresh and mineral-associated organic matter (OM) show that great parts of the POC, PON, and TEP are associated with suspended minerals, which are present in the water column throughout the year, whereas the occurrence of fresh TEP, POC, and PON is restricted to spring and summer months. In spite of a constantly high abundance of total TEP throughout the entire year, it is its fresh fraction that promotes the formation of larger and faster sinking biomineral flocs, thereby contributing to reducing the SPM concentration in the water column over spring and summer. Our results show that the different components of the SPM, such as minerals, extracellular OM and living organisms, form an integrated dynamic system with direct interactions and feedback controls.
Located in Library / RBINS Staff Publications 2022
Article Reference Organic Matter Composition of Biomineral Flocs and Its Influence on Suspended Particulate Matter Dynamics Along a Nearshore to Offshore Transect
The seasonal variation in concentration of transparent exopolymer particles (TEPs), particulate organic carbon (POC) and particulate organic nitrogen (PON) were investigated together with floc size and the concentration of suspended particulate matter (SPM) along the cross-shore gradient, from the high turbid nearshore toward the low-turbid offshore waters in the Southern Bight of the North Sea. Our data demonstrate that biophysical flocculation cannot be explained by these heterogeneous parameters, but requires a distinction between a more reactive labile (“fresh”) and a less reactive refractory (“mineral-associated”) fraction. Based on all data, we separated the labile and mineral-associated POC, PON, and TEP using a semi-empirical model approach. The model's estimates of fresh and mineral-associated organic matter (OM) show that great parts of the POC, PON, and TEP are associated with suspended minerals, which are present in the water column throughout the year, whereas the occurrence of fresh TEP, POC, and PON is restricted to spring and summer months. In spite of a constantly high abundance of total TEP throughout the entire year, it is its fresh fraction that promotes the formation of larger and faster sinking biomineral flocs, thereby contributing to reducing the SPM concentration in the water column over spring and summer. Our results show that the different components of the SPM, such as minerals, extracellular OM and living organisms, form an integrated dynamic system with direct interactions and feedback controls.
Located in Library / RBINS Staff Publications 2022
Inproceedings Reference text/h323 Organizing large-scale biodiversity inventories in the tropics: lessons from IBISCA projects
Leponce, M.1, Pascal, O.2, Novotny, V.3,4 & Y. Basset5 (1) Royal Belgian Institute of Natural Sciences, Belgium (Maurice.Leponce@naturalsciences.be); (2) Pro-Natura International, France; (3) University of South Bohemia, Czech Rep.; (4) Czech Academy of Sciences; (5) Smithsonian Tropical Research Institute, Republic of Panama. Background: IBISCA is an international and informal network of biodiversity experts conducting large-scale biotic inventories in various regions of the World (www.ibisca.net). Each IBISCA project is a collective effort addressing a global ecological question. IBISCA-Panama (2003-2004) aimed at estimating the overall arthropod diversity of a lowland rainforest while the Papua New Guinea survey (2012-2014), conducted in the framework of the “Our Planet Reviewed” programme, aimed at assessing the diversity generated by the elevational factor, from sea level up to the tree line. Methods: All projects are multi-taxa (with an emphasis on plants and arthropods), multi-strata and multi-methods. A central database (DB) is at the heart of each project. Results: The data flow follows a 10 step standard process: (1) sampling design which is often a trade-off between sampling effort and representativeness; (2) pre-printing of permanent labels with unique codes for samples and specimens; (3) collection of specimens with standardized mass collection methods; (4) on-site pre-sorting of material by helpers (para-taxonomists, students) to Order level; (5) further sorting to Family level by Taxonomic Working Group (TWIG) leaders and dispatching of specimens to experts; (6) identification of the material to (morpho-)species level by taxonomic experts who send afterwards the results to their TWIG leader; (7) control of the quality of data by TWIG leaders who fill a data entry template and send it to the database administrator; (8) import and cleaning of the data by the database administrator; (9) analysis and publication of the data by participants, either collectively or individually; (10) export of the DB to a public repository of data. Assisted data entry with high tech equipment (barcode scanner, PDA) reduces the risk of errors. Discussion/conclusion: Our experience shows that the main bottleneck in the data flow is the processing of the huge quantity of specimens collected. Solutions include securing enough funds for this critical step, training research technicians (para-taxonomists/ecologists) to assist main investigators and focusing on a limited number of informative yet tractable taxa. An additional benefit is that providing employment to local research assistants supports initiatives of local communities to conserve their forests.
Located in Library / RBINS Staff Publications 2017
Incollection Reference Organizing large-scale inventories of biodiversity in the tropics: the genesis and lessons of the project Our Planet Reviewed Papua New Guinea – land component
Located in Library / RBINS Staff Publications 2020
Inproceedings Reference Origin and patterns of biodiversity of subterranean aquatic Clitellata
Subterranean ecosystem biodiversity is characterized by a unique combination of four features that may account for its patterns and fluctuations at a global scale: (1) a low number of lineages due to environmental harshness, (2) a high proportion of endemic species as a result of habitat fragmentation and isolation, (3) a high level of relict taxa, best explained by the relative stability and antiquity of the habitat compared with most superficial habitats, and (4) food webs that are truncated at both the bottom (no primary producers) and the top (few or no predators and no specialized ones). In this review, we present a synthesis of the current state of knowledge of groundwater oligochaetes, and we investigate in what extent their biodiversity meets these criteria. The present knowledge is strongly biased in favour of the West-Palaearctic region, in particular the karst of Southern Europe. While our understanding of groundwater biodiversity in Europe and the United States has gained much during these last decades, many areas are undersampled in the world. To date, more than 300 nominal species have been found in ground waters all over the world (on about 1,700 and 1,100 aquatic and freshwater oligochaete species, respectively). Most of these species should be considered as incidentals or waifs; however, about one-third of them are found exclusively in this environment (stygobionts). Among the 21 families that are fully aquatic or include species occurring in aquatic habitats, 16 families are present in ground water. Stygobiont species belong to only 7 different families, harbouring 42 genera among which 17 are represented by a single species. Thirty-four per cent of the species are representatives of only two genera: Trichodrilus (Lumbriculidae) and Rhyacodrilus (Naididae). With 9 species, all being stygobiont, the Parvidrilidae is unique in being the only family, worldwide, comprising taxa that are restricted to groundwater habitats. Data on the distribution of stygobiont oligochaetes suggest pronounced endemism, nearly 60% of the species being known only from their type locality. The origins of subterranean oligochaete biodiversity probably involve multiple and successive colonization processes, both from marine and freshwater environments. The current distribution of Parvidrilidae, Rhyacodriloides (Rhyacodriloidinae), Delaya (Haplotaxidae), or species belonging to primarily marine genera, may be explained when assuming that these species are palaeoendemics or relicts, namely survivors of an old fauna that has long since become extinct in the surrounding areas. Aquatic oligochaetes appear to be pre-adapted to live in the subterranean environment. In the absence of genuine troglomorphic characters, their stygobiotic status can only be inferred from their exclusive presence in the subterranean environment. Valuable studies to enhance knowledge of subterranean aquatic oligochaetes will probably take more advantage of investigating adaptations that enable them to face scarceness of food and oxygen in groundwater, rather than focussing on an uncertain quest for morphological adaptations. Promising approaches would be to compare related hypogean and epigean species within the same genus, such as in Trichodrilus and Rhyacodrilus, or ecosystems the most similar to the underground such as lake hypolimnia and the deep sea. Keywords: ground water, Clitellata, biodiversity, patterns, endemism, relictuality, adaptation.
Located in Library / RBINS Staff Publications
Article Reference Origin of heterogenite as illustrated by rare earth element fractionation
Located in Library / No RBINS Staff publications
Article Reference Octet Stream Origin of nitrogen in the English Channel and Southern Bight of the North Sea ecosystems
Located in Library / RBINS Staff Publications 2017
Article Reference chemical/x-molconn-Z Origin of the forest steppe and exceptional grassland diversity in Transylvania (central-eastern Europe)
Aim The forest steppe of the Transylvanian Plain is a landscape of exceptionally diverse steppe-like and semi-natural grasslands. Is this vegetation a remnant of a once continuous temperate forest extensively cleared by humans, or has the area, since the last glacial, always been a forest steppe? Understanding the processes that drive temperate grassland formation is important because effective management of this biome is critical to the conservation of the European cultural landscape. Location Lake Stiucii, north-western Romania, central-eastern Europe. Methods We analysed multi-proxy variables (pollen, coprophilous fungi, plant macroremains, macrocharcoal) from a 55,000 year discontinuous sequence (c. 55,000–35,000; 13,000–0 cal. yr bp), integrating models of pollen-based vegetation cover, biome reconstruction, global atmospheric simulations and archaeological records. Results Needleleaf woodland occurred during glacial Marine Isotope Stage (MIS) 3, but contracted at the end of this period. Forest coverage of c. 55% (early Holocene) and 65% (mid-Holocene) prevailed through the Holocene, but Bronze Age humans extensively cleared forests after 3700 cal. yr bp. Forest coverage was most widespread between 8600 and 3700 cal. yr bp, whereas grasses, steppe and xerothermic forbs were most extensive between 11,700 and 8600 cal. yr bp and during the last 3700 cal. yr bp. Cerealia pollen indicate the presence of arable agriculture by c. 7000 cal. yr bp. Main conclusions We have provided the first unequivocal evidence for needleleaf woodland during glacial MIS 3 in this region. Extensive forests prevailed prior to 3700 cal. yr bp, challenging the hypothesis that the Transylvanian lowlands were never wooded following the last glaciation. However, these forests were never fully closed either, reflecting dry growing season conditions, recurrent fires and anthropogenic impacts, which have favoured grassland persistence throughout the Holocene. The longevity of natural and semi-natural grasslands in the region may explain their current exceptional biodiversity. This longer-term perspective implies that future climatic warming and associated fire will maintain these grasslands.
Located in Library / RBINS Staff Publications