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Inproceedings Reference Identifying EU-listed Aquatic Invasive Species by DNA-barcoding using currently available sequence data
Located in Library / RBINS Staff Publications 2022 OA
Article Reference Identifying insects with incomplete DNA barcode libraries, African fruit flies (Diptera: Tephritidae) as a test case.
Located in Library / RBINS Staff Publications
Article Reference Images are not and should not ever be type specimens: a rebuttal to Garraffoni & Freitas
Note. This original form of this rebuttal was submitted to Science on 3 March 2017 (limited to 300 words as per Science editorial policy) but rejected on 13 March 2017. Herein, we elaborate on our original Science submission in order to more fully address the issue without the length limitations. This rebuttal is followed by the list of the signatories who supported our original submission
Located in Library / RBINS Staff Publications 2017
Article Reference IMPACT OF ANTS ON THE GROWTH AND PRODUCTIVITY OF LAMTO SAVANNA PERENNIAL GRASSES (COTE D’IVOIRE)
Lamto savanna soil known to have low agronomic value paradoxically has one of the highest grasses biomass productions in the world. During recent surveys, ant nest were encountered under some grass tufts and it as suggested that ants are able to influence the availability of resources for these grasses and also other organisms. An interaction is suspected between these savanna grass tufts and their associated ants. Three grasses species Andropogon schirensis, Hyparrhenia diplandra and Loudetia simplex were chosen to inventory ant communities associated with grass tufts and to assess the influence of ant communities on growth and productivity of perennial grasses. Three study sites were chosen and each was subdivided in two experimental plots of 2500 m². By systematic digging out method we were collected 38 ant species under grass tufts. They belong to 19 genera and 7 sub-families. Lamto herbaceous stratum was dominated by Camponotus acvapinensis. Diameter measures of grass tufts base at ground level, have allowed establishing the link between the size of ant nest and grass tufts size. Pearson coefficient r ranged no correlation between the size of ants nest and grass tufts size. The association rate with ants of one of the grasses Hyparrhenia diplandra was greater than for two other grasses studied Andropogon schirensis and Loudetia simplex (54.208 % versus 49.433 %, and 38.496 % respectively). Parameters such as grasses height, diameter (at ground level, and 10 cm above), dry biomass and seeds production were assessed. The results showed that Hyparrhenia diplandra with ant nest recorded the best results of growth and productivity. Association with ants nest is beneficial for the growth and productivity of Lamto perennial grasses.
Located in Library / RBINS Staff Publications 2018
Article Reference Impact of chemical fertilizers on diversity and abundance of soil-litter arthropod communities in coffee and banana plantations in southern Rwanda
Few studies explored effects of chemical fertilizers on diversity and abundance of soillitter arthropods in the tropics. To fill this gap, a study focussed on the abundance of soil-litter arthropods and selected soil physicochemical properties in coffee plantations treated with chemical fertilizers and in plantations of coffee and banana treated with organic fertilizers and organic mulches in southern Rwanda. Each land use was replicated three times. Soil-litter arthropods were collected using pitfall traps and hand collection. They were identified to the family level using dichotomous keys. Soil have been collected using auger and taken to the laboratory for the analysis of soil pH, soil organic carbon, total nitrogen, phosphorus, and cation exchange capacity. Findings indicated a total of 12,945 individuals distributed into 3 classes, 16 orders, 50 families and 92 morphospecies, with higher abundance and diversity in coffee plantations treated with organic fertilizers and organic mulches. Collected soil-litter arthropods were mainly classified in the class Insecta, dominated in numbers by ants (Hymenoptera: Formicidae), while Coleoptera and Hemiptera had more families. However, soil under coffee plantations treated with organic fertilizers and organic mulches was acidic compared with the soil under coffee plantations treated with inorganic fertilizers and banana plantations treated with organic fertilizers and organic mulches. The relationships between soil-litter arthropods and soil physicochemical properties suggest that soillitter arthropods respond to the land use independently from soil physicochemical properties. We recommend further studies in coffee and other crop plantations in other regions of Rwanda to verify the findings of this study.
Located in Library / RBINS Staff Publications 2023
Article Reference Impact of Laying Date and Fire Ants on Hatchlings of Chelonoidis porteri on Santa Cruz Island, Galápagos, Ecuador
Chelonoidis land tortoises are iconic species endemic to the Galápagos Islands of Ecuador. Their populations have been dramatically reduced by human activities in the last three centuries, including indirect effects such as the introduction of invasive species. We investigated the mortality of eggs and hatchlings in 48 nests of Chelonoidis porteri on Santa Cruz Island with regard to various mortality causes such as the occurrence of fire ants and the date of laying. The average mortality rate was 0.56. Tropical Fire Ants (Solenopsis geminata) were present within 1 m of 75% of the C. porteri nests, and we encountered fire ants in 12.5% of excavated nests. We found no relationship between Tropical Fire Ant abundance and C. porteri egg and hatchling survivorship. We observed no signs of mold inside the nests. We determined that early deposition dates were associated with lower clutch survival and identified egg development as the critical life stage. Finally, we discuss the potential impacts of fire ants and climate change on tortoise survival and reproduction and stress the importance of taking these factors into account for the conservation of the endemic land tortoises of the Galápagos
Located in Library / RBINS Staff Publications 2018
Article Reference Impacts of Climate Change on the Global Invasion Potential of the African Clawed Frog Xenopus laevis
Located in Library / RBINS Staff Publications 2016
Inproceedings Reference Implementation of the EU CCS Directive in Europe: Results and Development in 2013
Located in Library / RBINS Staff Publications
Article Reference Importance of core and linear marsh elements for wetland arthropod diversity in an agricultural landscape
Located in Library / RBINS Staff Publications
Article Reference Improving 3D photogrammetry models through spectral imaging: Tooth enamel as a case study
Reflective or translucent materials are a challenge to digitize in 3D. Results are better with a matt coating although objects from museum collections are often too fragile or too valuable to be treated in this way. It is therefore essential that alternative solutions are found. This study analyzed spectral photogrammetry as a possible solution. Spectral photogrammetry is an emerging technique which uses images at different wavelengths to create 3D models. Tooth enamel is a challenging material to digitize. Six sets of teeth were photographed at different wavelengths. The results showed that the quality of the models enamels parts improved when taken with ultraviolet wavelengths whilst models were less accurate when photogrammetry was performed with the red and infrared spectrum. This can be explained by the optical properties of enamel. This study demonstrates that knowing the optical properties of a material beforehand could help future photogrammetric digitization of challenging materials.
Located in Library / RBINS Staff Publications 2019