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Grey wolf genomic history reveals a dual ancestry of dogs
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The grey wolf (Canis lupus) was the first species to give rise to a domestic population, and they remained widespread throughout the last Ice Age when many other large mammal species went extinct. Little is known, however, about the history and possible extinction of past wolf populations or when and where the wolf progenitors of the present-day dog lineage (Canis familiaris) lived1,2,3,4,5,6,7,8. Here we analysed 72 ancient wolf genomes spanning the last 100,000 years from Europe, Siberia and North America. We found that wolf populations were highly connected throughout the Late Pleistocene, with levels of differentiation an order of magnitude lower than they are today. This population connectivity allowed us to detect natural selection across the time series, including rapid fixation of mutations in the gene IFT88 40,000–30,000 years ago. We show that dogs are overall more closely related to ancient wolves from eastern Eurasia than to those from western Eurasia, suggesting a domestication process in the east. However, we also found that dogs in the Near East and Africa derive up to half of their ancestry from a distinct population related to modern southwest Eurasian wolves, reflecting either an independent domestication process or admixture from local wolves. None of the analysed ancient wolf genomes is a direct match for either of these dog ancestries, meaning that the exact progenitor populations remain to be located.
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RBINS Staff Publications 2022
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Ground Night Nesting in Chimpanzees: New Insights from Central Chimpanzees (Pan troglodytes troglodytes) in South-East Cameroon
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RBINS Staff Publications
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Groundwater biodiversity in Europe.
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RBINS Staff Publications
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Growth and reproduction of the shrimp population in a lagoon system in southern Benin (West Africa)
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RBINS Staff Publications 2024
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Growth changes in plaice, cod, haddock and saithe in the North Sea: a comparison of (post-)medieval and present-day growth rates based on otolith measurements
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Fishing effort has strongly increased in the North Sea since the mid-19th century, causing a substantial reduction in the population size of exploited fish stocks. As fisheries research has developed simultaneously with the industrialisation of the fisheries, our knowledge of population dynamics at low levels of exploitations is limited. Otoliths retrieved from archaeological excavations offer a unique opportunity to study growth rates in the past. This study compares historical and present-day growth rates for four commercially important demersal fish species. A total of 2532 modern otoliths (AD 1984–1999) and 1286 historical otoliths (AD 1200–1925) obtained from archaeological excavations in Belgium and Scotland were analysed. Comparison of the growth patterns between eras revealed a major increase in growth rate of haddock, whereas growth changes were not observed in saithe and only in the smaller size classes of plaice and cod. Comparison of our results with literature data indicates that the observed growth rate changes in plaice and cod occurred within the 20th century. Apparently the onset of industrialised fisheries has not greatly affected the growth of plaice, cod and saithe populations in the North Sea. This result contradicts the expectation of density-dependent limitation of growth during the era of pre-industrialised fishing, but is in agreement with the concentration hypothesis of Beverton (Neth. J. Sea Res. 34 (1995) 1) stating that species which concentrate spatially into nursery grounds during their early life-history may ‘saturate’ the carrying capacity of the juvenile habitat even though the adult part of the population is not limited by the adult habitat.
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RBINS Staff Publications
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Growth rate and chemical features of the massive calcium carbonate skeleton of Petrobiona massiliana (Baeriida: Calcaronea: Calcispongiae)
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RBINS Staff Publications
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GSA Data Repository 2014264 Ammonite Extinction and Nautilid Survival at the end of the Cretaceous
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RBINS Staff Publications
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Guide for the identification of archaeological sea sturgeon (Acipenser sturio and A. oxyrinchus) remains.
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Remains of sturgeons (Acipenser sturio and A. oxyrinchus) are regularly found on western European archaeological sites. The identification of these isolated bones should ideally be carried out with the aid of a comparative skeletal collection, consisting of modern specimens of different sizes. Because such reference material of sea sturgeons (A. sturio and A. oxyrinchus) is relatively rare and dispersed over many different museums and institutes, a practical guide is presented here as an aid to the identification of the most commonly found archaeological sturgeon remains. This guide, which is based on observations made on 64 individuals housed in 13 different natural history collections, should allow identifying most archaeological sturgeon remains from western European sites. Presented are the morphological characteristics of the bones of the skull roof and circumorbital region (posttemporal, dermopterotic, parietal, frontal, dermosphenotic, postorbital, jugal and supraorbital), bones of the braincase (parasphenoid), opercular series (subopercle and branchiostegals), the palatoquadrate and associated bones and lower jaw (palatopterygoid, dermopalatine and dentary), the hyoid and gill arches with the hyomandibula, the isolated skeletal elements from the pectoral girdle (clavicle, cleithrum and supracleithrum), the bones of the fin and fin supports (pectoral fin spine, fin rays and fulcra) and the dorsal, ventral, lateral and accessory scutes. For each element, descriptions and pictures are provided of modern and archaeological specimens. Regression equations allowing fish length reconstructions on the basis of single bone measurements are given for 14 elements and the scutes. Finally, criteria for species identification are provided. In the case of the dentary, dermopalatine and palatopterygoid, these are differences in shape of the skeletal elements, whereas for the dermal bones the external surface pattern is diagnostic when reconstructed fish length is over one meter.
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Habitat association and coexistence of endemic and introduced ant species in Galapagos Islands
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1. We investigated ant communities in all main vegetation zones of the model island of Santa Cruz in the Galápagos archipelago (155 collection points, spread over 21 sites; 28 ant species collected), and evaluated the distribution, coexistence, and effect of environmental factors in a community composed of endemic, probably endemic, and introduced ants of the New World and exotic origin. 2. Introduced species were the most frequent, occurring in 98% of the samples, yet endemic and probably endemic species still occurred in 54% of the samples, and constituted one of three most common species. The present study revealed that the habitat type along with altitude and the tree cover are the primary factors shaping ant community composition. Little evidence was found for a competitively structured assemblage of ant species. 3. The present study confirmed the predominance of two dominant invasive species, Solenopsis geminata Fabricius and Wasmannia auropunctata Roger, whose abundances are negatively correlated. The abundance of S. geminata is positively correlated with the overall species richness, and with the proportion of other introduced species. The presence of both invasive ants is associated with a low evenness of ant communities. 4. The present study (i) stresses the dominance of introduced species and the relative resistance of endemic species, (ii) highlights the on-going processes of species introductions and (iii) points out the need for adequate monitoring and conservation of the pristine and threatened environments that constitute the Galápagos Islands.
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RBINS Staff Publications 2016
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Habitat suitability modelling of four terrestrial slug species in the Iberian Peninsula (Arionidae: Geomalacus species)
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