Search publications of the members of the Royal Belgian institute of natural Sciences
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Distribution patterns of subsurface copepods and the impact of environmental parameters
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On the brink - investigating biodiversity in endangered crater lakes of the Amber Mountains National Park (Madagascar)
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Updating the zooplankton species list for the Belgian part of the North Sea
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Community structure of harpacticoid copepods in intertidal and shallow-water habitats of Cat Ba archipelago (Vietnam, South China Sea)
- The assemblage structure of harpacticoid copepods inhabiting the soft sediments of littoral and sublittoral areas of Cat Ba archipelago (South China Sea) is analysed. Three basic types of harpacticoid taxocenes were observed in the upper sublittoral. Main dominant species of taxocenes were Amphiascoides sp., Stenhelia latioperculata, Paramphiascella sp., Phyllopodopsyllus sp., Tisbe sp.1 and Amphiascoides sp. In addition, the main characteristics of harpacticoid species composition in littoral rock pools are described. A comparative analysis of shallow-water harpacticoid communities from different biotopes of the tropical region is presented, and shows that harpacticoid diversity and abundance are lowest in muddy sediments. Highest diversity and abundance are found in washed sands and silty sands with detritus. In general, the structure of muddy bottom communities is the most homogeneous throughout the tropics. Mangrove forests have no significant influence on harpacticoid taxocene structure. Harpacticoid associations of washed sands and silty sands with detritus demonstrate greater diversity and are region-specific.
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High-resolution X-ray CT for 3D petrography of ferruginous sandstone for an investigation of building stone decay
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Early diversification of seeds and seed-like structures
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The Middle Devonian plant assemblage from Dechra Aït Abdallah (Central Morocco) revisited
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Fifteen microsatellite loci for the decollate snail, Rumina decollata.
- We characterized 15 microsatellite loci from the decollate snail, Rumina decollata. Loci were screened in 21 individuals and several individuals of the congener Rumina saharica. There was ample allelic diversity (6–12 alleles per locus) but observed heterozygosity values were extremely low (0–0.421). This was expected given the high self-fertilization rate in this species. Ten of the 15 loci were successfully amplified in R. saharica. These loci provide tools for examining the population genetics and taxomomic boundaries in R. decollata and its allies.
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Optimisation of Polymerase Chain Reaction for Detection of Clostridium botulinum Type C and D in Bovine Samples.
- Botulism is a rare but serious paralytic illness caused by a nerve toxin that is produced by the bacterium Clostridium botulinum. The economic, medical and alimentary consequences can be catastrophic in case of an epizooty. A polymer-ase chain reaction (PCR)-based assay was developed for the detection of C. botulinumtoxigenic strains type C and D in bovine samples. This assay has proved to be less expensive, faster and simpler to use than the mouse bioassay, the current reference method for diagnosis of C. botulinum toxigenic strains. Three pairs of primers were designed, one for global detection of C. botulinum types C and D (primer pair Y), and two strain-specific pairs specifically designed for types C (primer pair VC) and D (primer pair VD). The PCR amplification conditions were optimized and evaluated on 13 bovine and two duck samples that had been previously tested by the mouse bioassay. In order to assess the impact of sample treatment, both DNA extracted from crude sam-ples and three different enrichment broths (TYG, CMM, CMM followed by TYG) were tested. A 100% sensitivity was observed when samples were enriched for 5 days in CMM followed by 1 day in TYG broth. False-negative results were encountered when C. botulinum was screened for in crude samples. These findings indicate that the current PCR is a reliable method for the detection of C. botulinum toxigenic strains type C and D in bovine samples but only after proper enrichment in CMM and TYG broth
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Defense by Volatiles in Leaf-Mining Insect Larvae
- Abstract The defense strategy of an insect toward natural enemies can include a trait that appears at first sight to contradict its defensive function. We explored phylogeny, chemistry, and defense efficiency of a peculiar group of hymenopteran sawfly larvae where this contradiction is obvious. Pseudodineurini larvae live in leaf mines that protect them from some enemies. Disturbed larvae also emit a clearly perceptible lemon-like odor produced by ventral glands, although the mine hampers the evaporation of the secretion. The mine could also lead to autointoxication of a larva by its own emitted volatiles. Citral was the major component in all Pseudodineurini species, and it efficiently repels ants. We conclude that full-grown larvae that leave their mine to pupate in the soil benefit from citral by avoiding attacks from ground-dwelling arthropods such as ants. In some species, we also detected biosynthetically related compounds, two 8-oxocitral diastereomers (i.e., (2E,6E)- and (2E,6Z)-2,6-dimethylocta-2,6-dienedial). Synthetic 8-oxocitral proved to be a potent fungicide, but not an ant repellent. The discrete distribution of 8-oxocitral was unrelated to species grouping in the phylogenetic tree. In contrast, we discovered that its presence was associated with species from humid and cold zones but absent in species favoring warm and dry environments. The former should be protected by 8-oxocitral when faced with a fungal infestation while crawling into the soil. Our work shows the importance of integrating knowledge about behavior, morphology, and life history stages for understanding the complex evolution of insects and especially their defense strategies.
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Towards a revision of the Neotropical soldierless termites (Isoptera : Termitidae): redescription of the genus Anoplotermes and description of Longustitermes, gen. nov.
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Incongruence between molecular phylogeny and morphological classification in amphipod crustaceans: A case study of Antarctic lysianassoids
- In Antarctic waters, the superfamily Lysianassoidea is one of the most important amphipod groups both in terms of species number and abundance. Dominant members of this superfamily are species of the orchomenid complex, found throughout the Southern Ocean. This study presents the first molecular phylogenetic analysis based on a representative subset of the Antarctic species belonging to different orchomenid genera and hence provides a framework for a systematic revision of these taxa. The current classification of the orchomenid genera is mainly based on mouthpart morphology. The validity of these morphological characters was assessed by resolving phylogenetic relationships using nuclear 28S rRNA and mitochondrial cytochrome oxidase subunit I sequences. The molecular data rejected most of the previously proposed taxonomic subdivisions within this complex. The genera Abyssorchomene and Orchomenella as well as the subgenus Orchomenopsis appeared to be non-monophyletic. This implies that the supposed diagnostic characters are likely a result of convergent evolution. Further, our results indicated the necessity of a revision of the family-level systematics.
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The Francesʼ Sparrowhawk Accipiter francesiae (Aves: Accipitridae) radiation on the Comoro islands
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DNA barcoding and evolutionary relationships in Accipiter Brisson, 1760 (Aves, Falconiformes: Accipitridae) with a focus on African and Eurasian representatives
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Host Shifts from Lamiales to Brassicaceae in the Sawfly Genus Athalia
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First Large-Scale DNA Barcoding Assessment of Reptiles in the Biodiversity Hotspot of Madagascar, Based on Newly Designed COI Primers
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Identification of forensically important Sarcophaga species (Diptera: Sarcophagidae) using the mitochondrial COI gene
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Why is the molecular identification of the forensically important blowfly species Lucilia caesar and L. illustris (family Calliphoridae) so problematic?
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"Speleothèmes" à l'Institut des Sciences Naturelles
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The Parvidrilidae – a diversified groundwater family: description of six new species from southern Europe, and clues for its phylogenetic position within Clitellata (Annelida)
- The Parvidrilidae Erséus, 1999 constitute the most recently described family of oligochaete microdriles. Prior to this study, Parvidrilus strayeri Erséus, 1999, and Parvidrilus spelaeus Martínez-Ansemil, Sambugar & Giani, 2002, found in groundwaters of the USA (Alabama) and Europe (Slovenia and Italy), respectively, were the only two species in this family. In this paper, six new species – Parvidrilus camachoi, Parvidrilus gianii, Parvidrilus jugeti, Parvidrilus meyssonnieri, Parvidrilus stochi, and Parvidrilus tomasini – and Parvidrilus gineti (Juget, 1959) comb. nov. are added to the family. With all species being stygobiont, the Parvidrilidae is unique in being the only family of oligochaetes worldwide comprising taxa that are restricted to groundwater habitats. Parvidrilids are exceedingly small worms whose principal morphological characteristics are the presence of hair setae in ventral bundles, the markedly posterior position of setae within the segments, the presence of mid-dorsal glandular pouches in mesosomial segments, the lateral development of the clitellum, the presence of a single male pore in segment XII, and the presence (or absence) of a single spermatheca. The phylogenetic relationships of the Parvidrilidae within the Clitellata were investigated using the nuclear 18S rRNA gene, and the most representative and taxonomically balanced data set of clitellate families available to date. The data were analysed by parsimony, maximum likelihood, and Bayesian inference. Irrespective of the method used, Parvidrilidae were placed far from Capilloventridae, one family once suggested to be closely related to parvidrilids. Although closer to Enchytraeidae than Phreodrilidae, two other suggested putative sister families, the exact position of Parvidrilidae within Clitellata still remained uncertain in the absence of branch support. The examination of reproductive structures, together with the similarity of other important anatomical traits of the new species herein described, reinforced the idea that phreodrilids were the best candidate to be the sister group to parvidrilids on morphological grounds. A fragment of the mitochondrial cytochrome oxidase I gene, used as a barcode, also genetically characterized a few Parvidrilus species. The observation that two species diverge from each other by high genetic distances, even though their type localities are more or less only 100 km apart, is interpreted in the context of low dispersal abilities of inhabitants of the subterranean aquatic ecosystem, and habitat heterogeneity. The Parvidrilidae appear to be a diversified, Holarctic, and probably widely distributed family in groundwater, but very often overlooked because of the small size and external similarity with the polychaete family Aeolosomatidae of its members.
