Search publications of the members of the Royal Belgian institute of natural Sciences
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Chièvres/Chièvres : témoins archéobotaniques d'un tannage végétal complexe à l'époque contemporaine
- Entre 2013 et 2015, une opération d'archéologie préventive d'envergure a été menée dans la commune de Chièvres par le Service Archéologique de Wallonie. Lors des travaux d’installation du collecteur d’eaux usées pour la station d’épuration, deux cuves d’une tannerie datant du 19ème siècle ont été découvertes. L'une des deux cuves a pu faire l’objet d’une fouille exhaustive et son remplissage a livré des matériaux organiques propices aux études archéobotaniques. Celles-ci ont été entreprises afin d'éclairer le fonctionnement de la tannerie et de fournir des informations sur le type de tannage utilisé. Le tannage est l'opération qui consiste à transformer la peau en cuir grâce aux tanins ; ces substances de différentes natures (végétales, minérales ou combinées) permettent la transformation d'une peau putrescible en un matériau durable et imputrescible. Sans surprise, les assemblages polliniques enregistrent de nombreux taxons riches en tanin tels que les arbres forestiers chêne, hêtre et châtaignier, et les fruitiers de type Prunus sp.. Parallèlement, des écorces de feuillus indéterminés ont été trouvées au sein des macrorestes végétaux. Ont aussi été identifiés dans les spectres polliniques certaines espèces herbacées (Artemisia, Plantago, Filipendula) et d'autres microfossiles intéressants, qui ont également pu jouer un rôle dans le processus de tannage étant donné leurs propriétés astringentes, antiseptiques, ou encore colorantes. Mais les découvertes les plus frappantes concernent le matériel carpologique avec l’identification de nombreux noyaux de dattes (Phoenix dactylifera) et de noyaux très fragmentés de Myrobolan ou cadou (Terminalia chebula), deux espèces exotiques importées. Autant la présence de la datte suscite des interrogations, autant la présence du Myrobolan ou cadou a toute sa place dans ce contexte. En effet, dès le début du 20ème siècle, le fruit séché du Myrobolan est l'une des matières tannantes les plus connues, exportée de manière considérable, principalement de Bombay (Brandis 1906). Au cours de cette présentation, nous essayerons également de reconstituer, ou tout du moins d'appréhender, le mode de tannage pratiqué à Chièvres, grâce aux analyses des micro- et macro-restes botaniques retrouvés. De plus, sur la base de recherches historiques et archivistiques, nous tenterons de comprendre l'importation, la distribution et l'utilisation du cadou en Belgique à l'époque contemporaine.
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Tributyltin: A Bottom–Up Regulator of the Crangon crangon Population?
- The restrictions and the concerted action of the global ban on the use and presence of tributyltin (TBT) in marine applications to protect ecosystems in the marine environment in 2008 was mainly based on the economic impact on shellfish industries and the dramatic extinction of local mollusk populations in the past. In contrast to the vast datasets on effects on mollusks, the knowledge on impacts on species from other taxa remained in the uncertain until almost two decades ago. The assumption on a long-term TBT-mediated pernicious metabolic bottom–up regulation of the crustacean Crangon crangon population was provoked by the outcome of an EU-project ‘Sources, Consumer Exposure and Risks of Organotin Contamination in Seafood.’ This study reported high TBT body burdens in C. crangon in 2003, at the start of the transition period to the global ban. Experimental research on the TBT impact in C. crangon focused on agonistic interference with natural ecdysteroid hormones at the metabolic pathways regulating growth and reproduction and the biogeochemical distribution of the chemical. In this paper, metabolic, topical and population-relevant biological endpoints in C. crangon and other crustaceans are evaluated in relation to the temporal and spatial trends on TBT’s occurrence and distribution in the field during and after the introduction of the tributyltin restrictions and endocrine-related incidents. Arguments are forwarded to relate the German Bight incident on growth and reproduction failure in the C. crangon population, despite the lack of direct evidence, to the pernicious impact of tributyltin in 1990/91 and previous years. The extreme occurrence of TBT in C. crangon from other parts of the southern North Sea and evidence on the high body burdens as dose metrics of exposure also feeds the suspicion on detrimental impacts in those areas. This paper further demonstrates the complexity of distinguishing and assessing the individual roles of unrelated stressors on a population in an integrated evaluation at the ecosystem level.
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Arion vulgaris Moquin-Tandon, 1855 à Vogar en Islande
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Mons/Spiennes : fouilles préventives et suivi de la construction du Centre d'interprétation des minières néolithiques de silex de Spiennes au lieu-dit "Petit-Spiennes".
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On a new species of the genus Cyprinotus (Crustacea, Ostracoda) from a temporary wetland in New Caledonia (Pacific Ocean), with a reappraisal of the genus
- The New Caledonia archipelago is known for its high level of endemism in both faunal and floral groups. Thus far, only 12 species of non-marine ostracods have been reported. After three expeditions to the main island of the archipelago (Grande Terre), about four times as many species were found, about half of which are probably new. Here, we describe a new species, Cyprinotus drubea sp. nov., which is characterised mainly by the hyper-developed dorsal hump on the right valve, much larger than in any other known Recent species in this genus. After a literature study of the other presumed species in Cyprinotus Brady, 1886, we retain seven Recent species in the genus, including the present new species. Cyprinotus crenatus (Turner, 1893), C. dentatus (Sharpe, 1910), C. flavescens Brady, 1898, C. inconstans Furtos, 1936, C. newmexicoensis Ferguson, 1967, C. ohanopecoshensis Ferguson, 1966, C. pellucidus (Sharpe, 1897), C. scytodus (Dobbin, 1941) and C. sulphurous Blake, 1931 are here all referred to the genus Heterocypris s. lat. Claus, 1892. Cyprinotus unispinifera Furtos, 1936 is assigned to the genus Cypricercus Sars, 1895. Cyprinotus tenuis Henry, 1923, C. fuscus Henry, 1919 and C. carinatus (King, 1855) are here classified as doubtful species. A checklist of the 14 non-marine ostracods, now including Cyprinotus drubea sp. nov. and Cypris granulata (Daday, 1910), thus far reported from New Caledonia, is provided. Herpetocypris caledonica Méhes, 1939 and H. caledonica var. minor Méhes, 1939 are synonymised with Candonocypris novaezelandiae (Baird, 1843).
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Extreme drought periods can change spatial effects on periphytic ostracod metacommunities in river-floodplain ecosystems
- Hydrological regimes are seasonally variable in river-floodplain ecosystems. Thus, since in these environments the local and regional factors change at different temporal scales, factors structuring metacommunities might also differ over time. However, temporal dynamics of metacommunities have rarely been assessed. Here, we investigated the influence of environmental and spatial factors over time on the metacommunity structuring of periphytic ostracods in the river-floodplain system of the Upper Paraná River (Brazil). The spatial factors turned out to be more important than environmental factors, and differences in the percentage of explanation of the factors structuring ostracod metacommunities over time were significant, mainly during extreme drought period. Our results showed that the high spatial influence might be related to the low connectivity amongst environments during such extreme drought period, which can increase dispersal limitation, and consequently can increase the turnover of ostracod species throughout the region, leading to a higher beta-diversity of ostracod metacommunities.
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The Freshwater Information Platform: An online network supporting freshwater biodiversity research and data publishing
- Species distribution data are crucial for understanding biodiversity dynamics and the underlying drivers. For freshwaters, which cover only a small proportion of the world's surface, but host a large variety of species, knowledge on species occurrences is extremely important as they are among the most endangered ecosystems globally. However, a huge body of data gathered by scientists and water managers is currently difficult to access: systematic data publishing practices have not been fully adopted yet and data embedded in scientific papers and research project websites are often challenging to extract. At the same time, data and knowledge generated through publically-funded research or monitoring programmes are considered a common good. The Freshwater Information Platform (FIP) aims at pooling freshwater related research information from multiple projects and initiatives to make it easily accessible for scientists, water managers, conservationists and the interested public. The FIP consists of several major components, three of which form its “data publication unit”: The Freshwater Metadatabase (1) is an online tool where data characterising and documenting actual datasets can be entered in a simple way. With one more mouseclick these metadata can then be published as open access articles in the connected Freshwater Metadata Journal. The second part of the unit is the Freshwater Biodiversity Data Portal (2), where we aim to mobilise and publish the connected freshwater biodiversity data (occurrence records) through GBIF (Global Biodiversity Information Facility). The use of collected datasets for large-scale analyses and models is demonstrated in the Global Freshwater Biodiversity Atlas (3) that publishes interactive online maps featuring research results on freshwater biodiversity, threats and conservation priorities. Here, we focus on introducing these components as tools to streamline open access freshwater data publication, arguing it will improve the capacity to protect and manage freshwater biodiversity in the face of global change. We further present linkages to and cooperations with other key initiatives in the field, namely the "Alliance for Freshwater Life" as well as "FreshwaterBON".
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The Freshwater Information Platform: a global online network providing data, tools and resources for science and policy support
- Freshwaters are among the most complex, dynamic, and diverse ecosystems globally. Despite their small share of the earth’s surface (less than 1%) they are home to over 10% of all known animal species. Biodiversity decrease in general and freshwater biodiversity decline in particular have recently received increasing attention, and various policy instruments are now targeting the conservation, protection and enhancement of biodiversity and associated ecosystem services. Surveillance programs as well as a variety of research projects have been producing a tremendous amount of freshwater-related information. Though there have been various attempts to build infrastructures for online collection of such data, tools and reports, they often provide only limited access to resources that can readily be extracted for conducting large scale analyses. Here, we present the Freshwater Information Platform, an open system of relevant freshwater biodiversity-related information. We provide a comprehensive overview of the platform’s core components, highlight their values, present options for their use, and discuss future developments. This is complemented by information on the platform’s current management structure, options for contributing data and research results and an outlook for the future.
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Unexpected fish diversity gradients in the Amazon basin
- Using the most comprehensive fish occurrence database, we evaluated the importance of ecological and historical drivers in diversity patterns of subdrainage basins across the Amazon system. Linear models reveal the influence of climatic conditions, habitat size and sub-basin isolation on species diversity. Unexpectedly, the species richness model also highlighted a negative upriver-downriver gradient, contrary to predictions of increasing richness at more downriver locations along fluvial gradients. This reverse gradient may be linked to the history of the Amazon drainage network, which, after isolation as western and eastern basins throughout the Miocene, only began flowing eastward 1–9 million years (Ma) ago. Our results suggest that the main center of fish diversity was located westward, with fish dispersal progressing eastward after the basins were united and the Amazon River assumed its modern course toward the Atlantic. This dispersal process seems not yet achieved, suggesting a recent formation of the current Amazon system.
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A striking case of convergent evolution in two species of Cypricercinae (Crustacea, Ostracoda), with the description of a new genus and species from Brazil
- Neostrandesia striata gen. n. sp. n. is here described and constitutes an interesting case of convergent evolution with Bradleytriebella lineata (Victor and Fernando, 1981). Both cypricercine species look superficially similar, with comparable valve and carapace shapes and especially ornamentation, as in both species the valves are densely set with longitudinal ridges. However, examination of the limb chaetotaxy shows important differences, especially in the chaetotaxy of the maxillula-palp which shows reduced numbers of claws and setae, and in the first thoracopod, in which seta ‘b’ has taken a giant aspect in the new taxon. These, and other, differences merit the allocation of these two species to different genera and even tribes within the subfamily Cypricercinae.
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Are Cardinium infections causing asexuality in non-marine ostracods?
- Endosymbiotic bacteria manipulating host biology and reproduction, and sometimes also causing parthenogenesis, are known from many metazoan taxa. Three recent studies have reported Cardinium endosymbionts in non-marine ostracods with different reproductive modes. Here, we test with all available data which (a)biotic factors could possibly shape infection patterns in these crustaceans. The presence of Cardinium in non-marine ostracods differs significantly between genders and between species with different reproductive modes. We observed more infections in females and found Cardinium only in ostracods with mixed and asexual reproduction. There is a significant positive correlation between latitude and Cardinium infection, which might be linked to geographic parthenogenesis, a common phenomenon in non-marine ostracods with mixed reproduction. We suggest that the observed patterns best fit a polymorphic equilibrium between endosymbionts and their hosts. Ostracods with mixed reproduction often produce young asexual lineages, implying that Cardinium infections might have occurred more recently, and are widespread. In contrast, putative ancient asexual darwinulid ostracod shows less frequent occurrence of Cardinium. Loss of endosymbionts in these asexual ostracods during their long evolutionary histories of millions of years seems a more likely explanation. Which factors influence Cardinium prevalence in non-marine ostracods needs to be further tested in life history experiments.
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Urbanization drives cross‐taxon declines in abundance and diversity at multiple spatial scales
- The increasing urbanization process is hypothesized to drastically alter (semi‐)natural environments with a concomitant major decline in species abundance and diversity. Yet, studies on this effect of urbanization, and the spatial scale at which it acts, are at present inconclusive due to the large heterogeneity in taxonomic groups and spatial scales at which this relationship has been investigated among studies. Comprehensive studies analysing this relationship across multiple animal groups and at multiple spatial scales are rare, hampering the assessment of how biodiversity generally responds to urbanization. We studied aquatic (cladocerans), limno‐terrestrial (bdelloid rotifers) and terrestrial (butterflies, ground beetles, ground‐ and web spiders, macro‐moths, orthopterans and snails) invertebrate groups using a hierarchical spatial design, wherein three local‐scale (200 m × 200 m) urbanization levels were repeatedly sampled across three landscape‐scale (3 km × 3 km) urbanization levels. We tested for local and landscape urbanization effects on abundance and species richness of each group, whereby total richness was partitioned into the average richness of local communities and the richness due to variation among local communities. Abundances of the terrestrial active dispersers declined in response to local urbanization, with reductions up to 85% for butterflies, while passive dispersers did not show any clear trend. Species richness also declined with increasing levels of urbanization, but responses were highly heterogeneous among the different groups with respect to the richness component and the spatial scale at which urbanization impacts richness. Depending on the group, species richness declined due to biotic homogenization and/or local species loss. This resulted in an overall decrease in total richness across groups in urban areas. These results provide strong support to the general negative impact of urbanization on abundance and species richness within habitat patches and highlight the importance of considering multiple spatial scales and taxa to assess the impacts of urbanization on biodiversity.
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EJT editorial standard for the semantic enhancement of specimen data in taxonomy literature
- This paper describes a set of guidelines for the citation of zoological and botanical specimens in the European Journal of Taxonomy. The guidelines stipulate controlled vocabularies and precise formats for presenting the specimens examined within a taxonomic publication, which allow for the rich data associated with the primary research material to be harvested, distributed and interlinked online via international biodiversity data aggregators. Herein we explain how the EJT editorial standard was defined and how this initiative fits into the journal’s project to semantically enhance its publications using the Plazi TaxPub DTD extension. By establishing a standardised format for the citation of taxonomic specimens, the journal intends to widen the distribution of and improve accessibility to the data it publishes. Authors who conform to these guidelines will benefit from higher visibility and new ways of visualising their work. In a wider context, we hope that other taxonomy journals will adopt this approach to their publications, adapting their working methods to enable domain-specific text mining to take place. If specimen data can be efficiently cited, harvested and linked to wider resources, we propose that there is also the potential to develop alternative metrics for assessing impact and productivity within the natural sciences.
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The new Southeast Asian genus Cambonilla gen. nov.(Zodariidae, Araneae):‘bis repetita placent’
- The new genus Cambonilla Jocqué gen. nov. is described on the base of two species, each known from both sexes. A cladistic analysis based on morphology, showed that the new genus is the sister-group of Heliconilla Dankittipakul, Jocqué & Singtripop, 2012 with which it shares the granulated carapace with branched setae and the marbled ventral abdominal pattern, but differs by the abdominal, tubular sclerotized protrusion around the pedicel in males and the absence of posterior ventral abdominal spines in the female. The type species Cambonilla securicula Jocqué gen. et sp. nov. was found in rainforest along the Mekong River in Cambodia and Laos. The second species Cambonilla symphonia Jocqué & Henrard gen. et sp. nov., provided with conspicuous femoral stridulating organs, was recorded from the same localities but in Cambodia only. An illustrated key to the genera of tropical Asia is presented.
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A mammal survey of the Serra Jeci Mountain Range, Mozambique, with a review of records from northern Mozambique’s inselbergs
- The mountains of northern Mozambique have remained poorly studied biologically until recent years with surveys covering a variety of taxonomic groups highlighting their biological and conservation value. Even so, the medium and large mammal fauna remains poorly known and to date no systematic mammal surveys have been published from any of Mozambique’s mountains. We present results of a medium and large mammal survey of Serra Jeci’s Mt Chitagal, Mt Sanga and the Njesi Plateau in Niassa, northern Mozambique; the first mammal diversity data collected from these isolated mountains. We recorded 27 mammal species, of which six represent range expansions; Sykes’s monkey (Cercophitecus mitis), Mozambique dwarf galago (Paragalago granti), Smith’s red rock hare (Pronolagus rupestris), lesser cane rat (Thryonomys gregorianus), rock hyrax (Procavia capensis) and African buffalo (Syncerus caffer). We also reviewed and collated records of medium and large mammals from previously published fieldwork on northern Mozambique’s mountains, amounting to a total of 34 large mammal species from seven montane areas, highlighting the lack of mammalian knowledge in Mozambique’s Afromontane habitats.
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Species niches, not traits, determine abundance and occupancy patterns: A multi‐site synthesis
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Precision mapping of snail habitat provides a powerful indicator of human schistosomiasis transmission
- Recently, the World Health Organization recognized that efforts to interrupt schistosomiasis transmission through mass drug administration have been ineffective in some regions; one of their new recommended strategies for global schistosomiasis control emphasizes targeting the freshwater snails that transmit schistosome parasites. We sought to identify robust indicators that would enable precision targeting of these snails. At the site of the world’s largest recorded schistosomiasis epidemic—the Lower Senegal River Basin in Senegal—intensive sampling revealed positive relationships between intermediate host snails (abundance, density, and prevalence) and human urogenital schistosomiasis reinfection (prevalence and intensity in schoolchildren after drug administration). However, we also found that snail distributions were so patchy in space and time that obtaining useful data required effort that exceeds what is feasible in standard monitoring and control campaigns. Instead, we identified several environmental proxies that were more effective than snail variables for predicting human infection: the area covered by suitable snail habitat (i.e., floating, nonemergent vegetation), the percent cover by suitable snail habitat, and size of the water contact area. Unlike snail surveys, which require hundreds of person-hours per site to conduct, habitat coverage and site area can be quickly estimated with drone or satellite imagery. This, in turn, makes possible large-scale, high-resolution estimation of human urogenital schistosomiasis risk to support targeting of both mass drug administration and snail control efforts.
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Karl Edward Havens (1957–2019)
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A juvenile skull from the early Palaeocene of China extends the appearance of crocodyloids in Asia back by 15–20 million years
- The earliest Crocodylia from Asia have been represented so far only by alligatoroids and planocraniids. Although definitive crocodyloids are not known until the late Eocene, it has been hypothesized that Asiatosuchus-like basal crocodyloids originated in Asia before the late Palaeocene. In this paper, we describe a new fossil crocodyloid from the lower Palaeocene of Qianshan Basin, Anhui Province, China. The skull and lower jaw fragment exhibit several characteristics typical of juvenile crocodylians. They also display a combination of features not seen in any other taxon, warranting the erection of a new species and genus, Qianshanosuchus youngi gen. & sp. nov. Its affinities are tested in phylogenetic analyses based on two recent character matrices of Eusuchia. To assess the effect of juvenile characteristics on the outcome of the phylogenetic analyses, juvenile specimens of extant crocodylian taxa are analysed in the same way, showing that the effect of their ontogenetic stage on their placement in the tree is minimal. Our analyses point to a basal crocodyloid position for Q. youngi. With these findings, the presence of Crocodyloidea in Asia is extended to the early Palaeocene, 15–20 Myr earlier than formerly thought. Furthermore, our results corroborate previous hypotheses of a Palaeocene dispersal route of Asiatosuchus-like crocodyloids from Asia into Europe.
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Revival and Revision of the genus Paroplites with description of two new species (Coleoptera, Cerambycidae, Prioninae)
