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Article Reference Urban rats as carriers of invasive Salmonella Typhimurium sequence type 313, Kisangani, Democratic Republic of Congo
Located in Library / RBINS Staff Publications 2022
Article Reference Urbanization drives community shifts towards thermophilic and dispersive species at local and landscape scales
Located in Library / RBINS Staff Publications 2017
Article Reference Urbanization drives cross‐taxon declines in abundance and diversity at multiple spatial scales
The increasing urbanization process is hypothesized to drastically alter (semi‐)natural environments with a concomitant major decline in species abundance and diversity. Yet, studies on this effect of urbanization, and the spatial scale at which it acts, are at present inconclusive due to the large heterogeneity in taxonomic groups and spatial scales at which this relationship has been investigated among studies. Comprehensive studies analysing this relationship across multiple animal groups and at multiple spatial scales are rare, hampering the assessment of how biodiversity generally responds to urbanization. We studied aquatic (cladocerans), limno‐terrestrial (bdelloid rotifers) and terrestrial (butterflies, ground beetles, ground‐ and web spiders, macro‐moths, orthopterans and snails) invertebrate groups using a hierarchical spatial design, wherein three local‐scale (200 m × 200 m) urbanization levels were repeatedly sampled across three landscape‐scale (3 km × 3 km) urbanization levels. We tested for local and landscape urbanization effects on abundance and species richness of each group, whereby total richness was partitioned into the average richness of local communities and the richness due to variation among local communities. Abundances of the terrestrial active dispersers declined in response to local urbanization, with reductions up to 85% for butterflies, while passive dispersers did not show any clear trend. Species richness also declined with increasing levels of urbanization, but responses were highly heterogeneous among the different groups with respect to the richness component and the spatial scale at which urbanization impacts richness. Depending on the group, species richness declined due to biotic homogenization and/or local species loss. This resulted in an overall decrease in total richness across groups in urban areas. These results provide strong support to the general negative impact of urbanization on abundance and species richness within habitat patches and highlight the importance of considering multiple spatial scales and taxa to assess the impacts of urbanization on biodiversity.
Located in Library / RBINS Staff Publications 2019
Article Reference Use of digital photogrammetry for the study of unstable slopes in urban areas: Case study of the El Biar landslide, Algiers
Recent developments in remote sensing techniques provide powerful tools for geomorphological studies. The geometric and kinematic characterization of landslides are key factors in understanding the mechanisms of movement. The purpose of this publication is to show the potential of digital photogrammetry in the spatiotemporal study of landslides in urban areas. The case study focuses on the landslide of El Biar in Algiers. Comparison of digital elevation models generated following an established methodology shows the morphological evolution of the site. Orthophotos are used to measure surface displacements. The analysis of horizontal displacements between 1995 and 2007 shows that the landslide of El Biar can be divided into two zones: a peripheral zone moving at an average speed of about 5 cm per year and a central zone moving at an average speed of about 10 cm per year. Comparing the results with those obtained by traditional survey methods shows a remarkable consistency, thus validating the techniques used. This study demonstrates that digital photogrammetry, when combined with geological and geotechnical data, can improve the characterization and understanding of landslides mechanisms, and thus help defining mitigation solutions.
Located in Library / RBINS Staff Publications
Article Reference Use of high-resolution seismic reflection data for paleogeographical reconstruction of shallow Lake Yamanaka (Fuji Five Lakes, Japan).
High-resolution seismic profiles, combined with the integration of published drilling data, provide a detailed paleoenvironmental history of Lake Yamanaka (Fuji Five Lakes, Japan). This study presents a detailed analysis of the different depositional stages of the area currently occupied by Lake Yamanaka (floodplain wetland, river and lake). From ca. 5500 cal yr BP to ca. 5050 cal yr BP, the Yamanaka basin was occupied by floodplain wetlands. During that period, the landscape was very stable and erosion on northeastern flank of Mt. Fuji was relatively limited. From ca. 5050 cal yr BP to ca. 3050 cal yr BP, the water level increased and the floodplain wetlands became a lake. From ca. 3050 cal yr BP to ca. 2050 cal yr BP, the water level progressively decreased, leading to a reduction in lake extent. During this lowering of the lake's water level, a 1 km2 mass-transport deposit modified the physiography of the lake floor. From ca. 2050 cal yr BP to ca. 1050 cal yr BP, the lake disappeared and a river flowing towards the northwest occupied the depression. Ponds occupied morphological lows formed by mass-transport deposits. From ca. 1050 cal yr BP to the present day, the lake water level rose again, connecting the ponds with the main lake. Since then, the lake water level has continued to rise to the current level. Lake water level fluctuations are the results of several factors that could be interconnected: (i) changes in precipitation rates; (ii) margin destabilization (the Yamanaka mass-transport deposit), (iii) changes in river inlets and therefore variation in water supplies, (iv) volcanic eruptions (scoria fall-out and lava flows) and (v) changes in vegetation cover. This study highlights the importance of coupling sediment cores and high-resolution seismic reflection profiling to identify lateral variation and modification of sedimentary inputs through time.
Located in Library / RBINS Staff Publications 2019
Article Reference Using DNA barcodes for assessing diversity in the family Hybotidae (Diptera, Empidoidea)
Located in Library / RBINS Staff Publications
Article Reference Using DNA barcodes for diversity assessment in Hybotidae (Diptera, Empidoidea)
Located in Library / RBINS Staff Publications
Article Reference Using Hyperspectral Remote Sensing to Monitor Water Quality in Drinking Water Reservoirs
At the Blankaart Water Production Center, a reservoir containing 3 million m3 of raw surface water acts as a first biologic treatment step before further processing to drinking water. Over the past decade, severe algal blooms have occurred in the reservoir, hampering the water production. Therefore, strategies (e.g., the injection of algaecide) have been looked at to prevent these from happening or try to control them. In this context, the HYperspectral Pointable System for Terrestrial and Aquatic Radiometry (HYPSTAR), installed since early 2021, helps in monitoring the effectiveness of these strategies. Indeed, the HYPSTAR provides, at a very high temporal resolution, bio-optical parameters related to the water quality, i.e., Chlorophyll-a (Chla) concentrations and suspended particulate matter (SPM). The present paper shows how the raw in situ hyperspectral data (a total of 8116 spectra recorded between 2021-02-03 and 2022-08-03, of which 2988 spectra passed the quality check) are processed to find the water-leaving reflectance and how SPM and Chla are derived from it. Based on a limited number of validation data, we also discuss the potential of retrieving phycocyanin (an accessory pigment unique to freshwater cyanobacteria). The results show the benefits of the high temporal resolution of the HYPSTAR to provide near real-time water quality indicators. The study confirms that, in conjunction with a few water sampling data used for validation, the HYPSTAR can be used as a quick and cost-effective method to detect and monitor phytoplankton blooms.
Located in Library / RBINS Staff Publications 2022
Article Reference Using MALDI-TOF mass spectrometry to identify ticks collected on domestic and wild animals from the Democratic Republic of the Congo
Located in Library / RBINS Staff Publications 2021
Article Reference Using next-generation sequencing to improve DNA barcoding: lessons from a small-scale study of wild bee species (Hymenoptera, Halictidae)
Located in Library / RBINS Staff Publications 2018