Introduction: Efforts to collect ecological data have intensified over the last decade. This is especially true for freshwater habitats, which are among the most impacted by human activity and yet lagging behind in terms of data availability. Now, to support conservation programmes and management decisions, these data need to be analyzed and interpreted; a process that can be complex and time consuming. The South African Biodiversity Data Pipeline for Wetlands and Waterbirds (BIRDIE) aims to help fast and efficient information uptake, bridging the gap between raw ecological datasets and the information final users need. <br /><br /> Methods: BIRDIE is a full data pipeline that takes up raw data, and estimates indicators related to waterbird populations, while keeping track of their associated uncertainty. At present, we focus on the assessment of species abundance and distribution in South Africa using two citizen-science bird monitoring datasets, namely: the African Bird Atlas Project and the Coordinated Waterbird Counts. These data are analyzed with occupancy and state-space models, respectively. In addition, a suite of environmental layers help contextualize waterbird population indicators, and link these to the ecological condition of the supporting wetlands. Both data and estimated indicators are accessible to end users through an online portal and web services. <br /><br /> Results and discussion: We have designed a modular system that includes tasks, such as: data cleaning, statistical analysis, diagnostics, and computation of indicators. Envisioned users of BIRDIE include government officials, conservation managers, researchers and the general public, all of whom have been engaged throughout the project. Acknowledging that conservation programmes run at multiple spatial and temporal scales, we have developed a granular framework in which indicators are estimated at small scales, and then these are aggregated to compute similar indicators at broader scales. Thus, the online portal is designed to provide spatial and temporal visualization of the indicators using maps, time series and pre-compiled reports for species, sites and conservation programmes. In the future, we aim to expand the geographical coverage of the pipeline to other African countries, and develop more indicators specific to the ecological structure and function of wetlands.
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RBINS Staff Publications 2023
The upper part of the Kortrijk Clay Formation (the Roubaix Clay and Aalbeke Clay Members of mid-Ypresian age) has been exposed in road and canal cuttings and clay quarries in the Kortrijk area (western Belgium), and penetrated by several cored boreholes. It is overlain disconformably by the Mont-Panisel Sand Member of the Hyon Sand Formation (upper middle Ypresian). The Roubaix Clay Member contains diverse and well-preserved calcareous nannofossils, dinoflagellate cysts, foraminifera, ostracods and other calcitic microfossils, and less well-preserved mollusc assemblages, while the Aalbeke Clay Member is secondarily decalcified. The calcareous nannofossil subdivision of upper NP11 and lower NP12 has been recognised in the Kortrijk area, and calibrated with the NW European mid-Ypresian dinoflagellate cyst, ostracod and planktonic foraminiferal zones and datums (e.g. Subbotina influx). Several medium-scale depositional sequences, with an estimated duration of 400 kyr or less, have been recorded. Their respective boundaries coincide with the resistivity maxima identified on the majority of the wireline log profiles of the Belgian Ypresian. Integrated biostratigraphic, magnetostratigraphic and sequence stratigraphic analysis enables correlation with other areas in Belgium, with the London Clay Formation of southern England, and with the standard chronostratigraphic scale. A marine erosion surface has been identified at the base of Unit 20 in the Kortrijk area (mid-Ypresian, early Biochron NP12, middle C24n.1n, ~ 52.8 Ma), corresponding to the first occurrence of estuarine channel-fill units in southern England. This indicates a brief but profound sea-level fall, either eustatically or tectonically controlled. The composite Kortrijk section is proposed as a reference section for the middle Ypresian in the southern North Sea Basin, and for similar settings in mid- to high-latitudes of the Northern Hemisphere (e.g. Kazakhstan and Crimea).
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RBINS Staff Publications 2017
