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Delafossite structure of heterogenite polytypes (HCoO2) by Raman and infrared micro-spectroscopy
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Heterogenite is commonly referred in mineralogy literature as a cobalt oxy-hydroxide CoO(OH). However, detailed analysis of Raman and infrared spectra acquired on particularly well-crystallized natural samples of heterogenite suggests that the mineral can be characterized by a delafossite-type structure, with a general chemical formula ABO2. Indeed, the Raman spectrum of heterogenite, along the one with grimaldiite (HCrO2), lacks visible free OH-group vibrational modes, while the infrared spectrum shows strong hydrogen bond absorption bands. HCoO2 is thus a better formulation of heterogenite that describes more clearly its vibrational behavior and avoids the confusion in literature. Electronic backscattered diffraction (EBSD) is then used to distinguish and map the 2H and 3R heterogenite natural polytypes for the first time. The comparison of EBSD and Raman mappings clearly indicates that the 2H polytype is characterized by an additional peak at 1220 cm− 1. It's presence/absence is therefore an efficient tool to distinguish both polytypes.
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RBINS Staff Publications 2016
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New carnivoraforms from the Latest Paleocene of Europe and their bearing on the origin and radiation of Carnivoraformes (Carnivoramorpha, Mammalia)
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We report the discovery of the earliest European carnivoraforms, based on two new taxa from the latest Paleocene of France and Romania. A new species of Vassacyon, V. prieuri, from the locality of Rivecourt (MP6b; Oise, France) (MP D Mammalian Paleogene reference levels) is described based on a dentary fragment and isolated teeth. This species displays several primitive features compared with species of Vassacyon known from the early Eocene of North America and Europe. A second Paleocene carnivoraform, cf. Gracilocyon sp., is described based on fragmentary specimens from the locality of Jibou (MP6b; Transylvania, Romania). Carnivoraformes were previously unknown in Europe before the Eocene, and Vassacyon prieuri and cf. Gracilocyon sp. are their oldest records in Europe. These discoveries favor the hypothesis of a dispersal of these two genera from Europe to North America during the Paleocene-Eocene Thermal Maximum. Vassacyon prieuri and cf. Gracilocyon sp. strengthen support for the level MP6b and its correlation with the Clarkforkian. The geographic origin of the Carnivoraformes remains unknown. However, based on the observed biochronological and geographic distributions of the carnivoraforms, we infer a possible Asian origin for this group. In this scenario, Gracilocyon and Vassacyon dispersed to Europe during the Clarkforkian MP6b time, probably together with rodent taxa, whereas Uintacyon dispersed from Asia to North America shortly after rodents and tillodonts
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RBINS Staff Publications 2016
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First insights into the diversity of gill monogeneans of ‘Gnathochromis’ and Limnochromis (Teleostei, Cichlidae) in Burundi: do the parasites mirror host ecology and phylogenetic history?
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Monogenea is one of the most species-rich groups of parasitic flatworms worldwide, with many species described only recently, which is particularly true for African monogeneans. For example, Cichlidogyrus, a genus mostly occurring on African cichlids, comprises more than 100 nominal species. Twenty-two of these have been described from Lake Tanganyika, a famous biodiversity hotspot in which many vertebrate and invertebrate taxa, including monogeneans, underwent unique and spectacular radiations. Given their often high degrees of host specificity, parasitic monogeneans were also used as a potential tool to uncover host species relationships. This study presents the first investigation of the monogenean fauna occurring on the gills of endemic ‘Gnathochromis’ species along the Burundese coastline of Lake Tanganyika. We test whether their monogenean fauna reflects the different phylogenetic position and ecological niche of ‘Gnathochromis’ pfefferi and Gnathochromis permaxillaris. Worms collected from specimens of Limnochromis auritus, a cichlid belonging to the same cichlid tribe as G. permaxillaris, were used for comparison. Morphological as well as genetic characterisation was used for parasite identification. In total, all 73 Cichlidogyrus individuals collected from ‘G.’ pfefferi were identified as C. irenae. This is the only representative of Cichlidogyrus previously described from ‘G.’ pfefferi, its type host. Gnathochromis permaxillaris is infected by a species of Cichlidogyrus morphologically very similar to C. gillardinae. The monogenean species collected from L. auritus is considered as new for science, but sample size was insufficient for a formal description. Our results confirm previous suggestions that ‘G.’ pfefferi as a good disperser is infected by a single monogenean species across the entire Lake Tanganyika. Although G. permaxillaris and L. auritus are placed in the same tribe, Cichlidogyrus sp. occurring on G. permaxillaris is morphologically more similar to C. irenae from ‘G.’ pfefferi, than to the Cichlidogyrus species found on L. auritus. Various evolutionary processes, such as host-switching or duplication events, might underlie the pattern observed in this particular parasite-host system. Additional samples for the Cichlidogyrus species occuring on G. permaxillaris and L. auritus are needed to unravel their evolutionary history by means of (co-)phylogenetic analyses.
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RBINS Staff Publications 2016
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A 365-Million-Year-Old Freshwater Community Reveals Morphological and Ecological Stasis in Branchiopod Crustaceans
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Branchiopod crustaceans are represented by fairy, tadpole, and clam shrimps (Anostraca, Notostraca, Laevicaudata, Spinicaudata), which typically inhabit temporary freshwater bodies, and water fleas (Cladoceromorpha), which live in all kinds of freshwater and occasionally marine environments. The earliest branchiopods occur in the Cambrian, where they are represented by complete body fossils from Sweden such as Rehbachiella kinnekullensis and isolated mandibles preserved as small carbonaceous fossils from Canada. The earliest known continental branchiopods are associated with hot spring environments represented by the Early Devonian Rhynie Chert of Scotland (410 million years ago) and include possible stem-group or crown-group Anostraca, Notostraca, and clam shrimps or Cladoceromorpha, which differ morphologically from their modern counterparts. Here we report the discovery of an ephemeral pool branchiopod community from the 365-million-year-old Strud locality of Belgium. It is characterized by new anostracans and spinicaudatans, closely resembling extant species, and the earliest notostracan, Strudops goldenbergi. These branchiopods released resting eggs into the sediment in a manner similar to their modern representatives. We infer that this reproductive strategy was critical to overcoming environmental constraints such as seasonal desiccation imposed by living on land. The pioneer colonization of ephemeral freshwater pools by branchiopods in the Devonian was followed by remarkable ecological and morphological stasis that persists to the present day.
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Nouvelle contribution à l'étude du genre Autocrates Thomson, 1860 avec la description d'une nouvelle espèce du Vietnam: A. ivanovi n.sp. (Coleoptera: Trictenotomidae).
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RBINS Staff Publications 2016
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Transcription, signaling receptor activity, oxidative phosphorylation and fatty acid metabolism mediate the presence of closely-related cryptic species in distinct intertidal and cold-seep habitats
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Taxonomic challenges in freshwater fishes: a mismatch between morphology and DNA barcoding in fish of the north-eastern part of the Congo basin
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This study evaluates the utility of DNA barcoding to traditional morphology-based species identifications for the fish fauna of the north-eastern Congo basin. We compared DNA sequences (COI) of 821 samples from 206 morphologically identified species. Best match, best close match and all species barcoding analyses resulted in a rather low identification success of 87.5%, 84.5% and 64.1%, respectively. The ratio ‘nearest-neighbour distance/maximum intraspecific divergence’ was lower than 1 for 26.1% of the samples, indicating possible taxonomic problems. In ten genera, belonging to six families, the number of species inferred from mtDNA data exceeded the number of species identified using morphological features; and in four cases indications of possible synonymy were detected. Finally, the DNA barcodes confirmed previously known identification problems within certain genera of the Clariidae, Cyprinidae and Mormyridae. Our results underscore the large number of taxonomic problems lingering in the taxonomy of the fish fauna of the Congo basin and illustrate why DNA barcodes will contribute to future efforts to compile a reliable taxonomic inventory of the Congo basin fish fauna. Therefore, the obtained barcodes were deposited in the reference barcode library of the Barcode of Life Initiative.
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Comparative phylogeographies of six species of hinged terrapins (Pelusios spp.) reveal discordant patterns and unexpected differentiation in the P. castaneus/P. chapini complex and P. rhodesianus
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Towards a revision of the Neotropical soldierless termites (Isoptera: Termitidae): redescription of the genus <i>Grigiotermes</i> Mathews and description of five new genera
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RBINS Staff Publications 2016
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Detection of shipwrecks in ocean colour satellite imagery
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Waterborne swath acoustic and airborne laser systems are the main methods used to detect and investigate fully submerged shipwreck sites. In the nearshore, waterborne techniques are compromised as search tools as their effective swath is a function of water depth, necessitating very close survey line spacing in shallow water, increasing cost accordingly. Additionally, in turbid coastal waters bathymetric LiDAR is ineffective as it relies on clear non-turbid water. Therefore, the nearshore turbid zone represents a challenging area for archaeologists in the search for fully submerged archaeological sites. In this study, we describe a new methodology to detect the presence of submerged shipwrecks using ocean colour satellite imagery in turbid waters. We demonstrate that wrecks generate Suspended Particulate Matter (SPM) concentration signals that can be detected by high-resolution ocean colour satellite data such as Landsat-8. Surface SPM plumes extend downstream for up to 4 km from wrecks, with measured concentrations ranging between 15 and 95 mg/l. The overall ratio between the plume and background SPM concentrations is about 1.4. During slack tidal phases sediments in suspension settle to create fluffy mud deposits near the seabed. Scour pits developed around wrecks act as sinks where fine-grained suspended material is preferentially deposited at slacks. The scour pits subsequently act as sources for suspended material when the bottom current increases after slacks. SPM plumes develop immediately before maximum ebb or flood current is reached, during maximum current and immediately after. Particulate matter is suspended in sufficient concentrations to be detected in ocean colour data. The ability to detect submerged shipwrecks from satellite remote sensors is of benefit to archaeological scientists and resource managers interesting in locating wrecks and investigating processes driving their evolution.
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