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Inbook Reference Self-domestication or human control? The Upper Palaeolithic domestication of the wolf
Located in Library / RBINS Staff Publications 2018
Article Reference Octet Stream Sensitivity analysis of the dark spectrum fitting atmospheric correction for metre- and decametre-scale satellite imagery using autonomous hyperspectral radiometry
The performance of the dark spectrum fitting (DSF) atmospheric correction algorithm is evaluated using matchups between metre- and decametre-scale satellite imagery as processed with ACOLITE and measurements from autonomous PANTHYR hyperspectral radiometer systems deployed in the Adriatic and North Sea. Imagery from the operational land imager (OLI) on Landsat 8, the multispectral instrument (MSI) on Sentinel-2 A and B, and the PlanetScope CubeSat constellation was processed for both sites using a fixed atmospheric path reflectance in a small region of interest around the system&\#x2019;s deployment location, using a number of processing settings, including a new sky reflectance correction. The mean absolute relative differences (MARD) between in situ and satellite measured reflectances reach <20&\#x0025; in the Blue and 11&\#x0025; in the Green bands around 490 and 560 nm for the best performing configuration for MSI and OLI. Higher relative errors are found for the shortest Blue bands around 440 nm (30&\#x2013;100&\#x0025; MARD), and in the Red-Edge and near-infrared bands (35&\#x2013;100&\#x0025; MARD), largely influenced by the lower absolute data range in the observations. Root mean squared differences (RMSD) increase from 0.005 in the NIR to about 0.015&\#x2013;0.020 in the Blue band, consistent with increasing atmospheric path reflectance. Validation of the Red-Edge and NIR bands on Sentinel-2 is presented, as well as for the first time, the Panchromatic band (17&\#x2013;26&\#x0025; MARD) on Landsat 8, and the derived Orange contra-band (8&\#x2013;33&\#x0025; MARD for waters in the algorithm domain, and around 40&\#x2013;80&\#x0025; MARD overall). For Sentinel-2, excluding the SWIR bands from the DSF gave better performances, likely due to calibration issues of MSI at longer wavelengths. Excluding the SWIR on Landsat 8 gave good performance as well, indicating robustness of the DSF to the available band set. The DSF performance was found to be rather insensitive to (1) the wavelength spacing in the lookup tables used for the atmospheric correction, (2) the use of default or ancillary information on gas concentration and atmospheric pressure, and (3) the size of the ROI over which the path reflectance is estimated. The performance of the PlanetScope constellation is found to be similar to previously published results, with the standard DSF giving the best results in the visible bands in terms of MARD (24&\#x2013;40&\#x0025; overall, and 18&\#x2013;29&\#x0025; for the turbid site). The new sky reflectance correction gave mixed results, although it reduced the mean biases for certain configurations and improved results for the processing excluding the SWIR bands, giving lower RMSD and MARD especially at longer wavelengths (>600 nm). The results presented in this article should serve as guidelines for general use of ACOLITE and the DSF.
Located in Library / RBINS Staff Publications 2020
Article Reference Sequence mapping of Holocene coastal lowlands. The application of the Streif classification system in the Belgian coastal plain
Located in Library / RBINS Staff Publications
Article Reference Serial population extinctions in a small mammal indicate Late Pleistocene ecosystem instability
The Late Pleistocene global extinction of many terrestrial mammal species has been a subject of intensive scientific study for over a century, yet the relative contributions of environmental changes and the global expansion of humans remain unresolved. A defining component of these extinctions is a bias toward large species, with the majority of small-mammal taxa apparently surviving into the present. Here, we investigate the population-level history of a key tundra-specialist small mammal, the collared lemming (Dicrostonyx torquatus), to explore whether events during the Late Pleistocene had a discernible effect beyond the large mammal fauna. Using ancient DNA techniques to sample across three sites in North-West Europe, we observe a dramatic reduction in genetic diversity in this species over the last 50,000 y. We further identify a series of extinction-recolonization events, indicating a previously unrecognized instability in Late Pleistocene small-mammal populations, which we link with climatic fluctuations. Our results reveal climate-associated, repeated regional extinctions in a keystone prey species across the Late Pleistocene, a pattern likely to have had an impact on the wider steppe-tundra community, and one that is concordant with environmental change as a major force in structuring Late Pleistocene biodiversity.
Located in Library / RBINS Staff Publications
Article Reference Setting the Context for Offshore Wind Development Effects on Fish and Fisheries
Changes to fisheries that result from offshore wind farm (OWF) installations may be considered good or bad depending on various stakeholders’ perspectives. OWFs can act as artificial reefs that may benefit secondary fish production, but such effects may also have ecological consequences. The fisheries exclusion effect that turns some OWFs into no-go areas, hence effectively no-take zones, could provide resource enhancements or redistribution. However, the displacement of fishing effort may have consequences to fisheries elsewhere. Changes in the sensory environment related to sound, as well as electromagnetic fields and physical alterations of current and wind wakes, may have as yet unknown impacts on fisheries resources. Understanding the interactions among effect type, OWF development phase, and spatiotemporal population dynamics of commercial and recreational species remains challenging, exemplified by the commercial fishery lobster genus Homarus in European and North American waters. While knowledge of the interactions between resource species and OWFs is improving, there remain questions on the wider interaction between and consequences of OWFs and fisheries. Studies of this wider relevance should aim to improve understanding of the economic and societal impacts of OWFs linked to ecosystem services that support fisheries. Furthermore, assisting fisheries management and providing advice requires monitoring and survey data collection at appropriate spatiotemporal scales. This information will help to determine whether OWFs have any meaningful impact on regional fisheries, and increased investments will be needed to target scientifically appropriate monitoring of OWFs and fisheries, which is supported by better integrated policy and regulation.
Located in Library / RBINS Staff Publications 2020
Article Reference Seven new species and two new genera of Physocypria sensu latu (Crustacea, Ostracoda) from Brazilian floodplains
We describe seven new species in two new genera of the Physocypria sensu latu clade (Cyclocypridinae) from three of the main Brazilian floodplains. Brasilocypria pea gen. et spec. nov. and Brasilocypria ricardopintoi gen. et spec. nov. occur in the Upper Paraná River floodplain and the South Matogrossense Pantanal, Claudecypria mesquitai gen. et spec. nov., Brasilocypria alisonae gen. et spec. nov. and Claudecypria rochei gen. et spec. nov. were found in the South Matogrossense Pantanal, and Brasilocypria lordi gen. et spec. nov. and Brasilocypria namiotkoi gen. et spec. nov. occur in the Amazon River floodplain. All new species here described were found as sexual populations. Generally, they have a short and suboval carapace, with the left valve overlapping the right valve on all sides, except for the dorsal side in some species. The morphology of the hemipenis and the prehensile palps, together with the shape of the valves, were the most important characters to distinguish the species. Size differences between species can be substantial. Several characters, such as the absence in all new species of the short accompanying seta of the five natatory setae on the antenna; the presence in all new species of a long seta next to the two a-setae on the first thoracopod, and the presence/absence or differences in length of specific setae on the second and third thoracopod, are relevant for the generic diagnoses. We also redefine Keysercypria Karanovic, 2011.
Located in Library / RBINS Staff Publications 2023
Article Reference Seven new species and two new subspecies of Sclerocypris SARS, 1924 from Africa, with new records of some other Megalocypridinis (Crustacea, Ostracoda)
Located in Library / RBINS Staff Publications
Article Reference Seven new species of Trichodorus (Diphtherophorina, Trichodoridae) from Spain, an apparent centre of speciation.
Located in Library / RBINS Staff Publications
Article Reference Sex and ostracods: a new synthesis. In: MARTENS, K. (ed.). Sex and Parthenogenesis – evolutionary ecology of reproductive modes in non-marine ostracods
Located in Library / RBINS Staff Publications
Article Reference Sex and transposable elements in ostracods (Crustacea, Ostracoda)
Located in Library / RBINS Staff Publications