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Mitogenomic characterization and systematic placement of the Congo blind barb Caecobarbus geertsii (Cypriniformes: Cyprinidae)
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This study presents the first complete mitochondrial genome (mitogenome) of Caecobarbus geertsii, the Congo blind barb, a cave-dwelling, CITES-protected, cyprinid fish endemic to the Lower Congo basin (DRC). The length of the circular mitogenome is 16,565 base pairs. The 13 protein coding genes, 2 ribosomal RNA genes and 22 transfer RNA genes are similar in position and direction to those of other members of the family Cyprinidae. Phylogenetic analyses including 28 complete mitogenomes from representatives of the subfamily Smiliogastrinae (Cyprinidae), showed that Caecobarbus was nested within a clade including representatives of the genus Enteromius. The data presented in this study provide information on the molecular identification and classification of this threatened species. The results further suggest the need for a taxonomic revision of the genus Enteromius.
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RBINS Staff Publications 2020
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Mixed breeding system in the hermaphroditic land slug Arion intermedius (Stylommatophora, Arionidae)
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RBINS Staff Publications
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Mn oxides as efficient traps for metal pollutants in a polyphase low-temperature Pliocene environment: A case study in the Tamra iron mine, Nefza mining district, Tunisia
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Mobility and origin of camels in the Roman Empire through serial stable carbon and oxygen isotopes variations in tooth enamel
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Although camels are not indigenous to Europe, they have been found at several sites from several Roman provinces dating from the beginning of the 1st century AD onwards. It must have been beneficial to bring them there. Based on finds of remains from juvenile individuals (e.g. from Tanais), it has been suggested that the Romans might have systematically bred camels within Europe. For this study, we took serial samples of the enamel of four camels from European sites (Innsbruck-Wilten, Mamer-Bertrange, Tongeren, and Trier) dating to the 2nd - 4th century AD. We measured the relative abundances of carbon and oxygen isotopes of the carbonate fraction from the tooth enamel. The continuous record of oxygen and carbon isotopic composition of the intra-tooth enamel serial samples reflects the climate and habitat in which an individual lived during the time of tooth mineralization. We used these data to make a rough evaluation of the areas of origin consistent with the relative abundances of the isotopes from the enamel of the camels and attempt to reconstruct their life history and mobility behavior based on the different ecological characteristics of the habitats represented in the isotopic data. Furthermore, the data can function as an additional proxy for species determination, due to the different habitats of Camelus bactrianus and Camelus dromedarius. This work also yields interesting insights on the similarities in the mobility pattern of the camels from Mamer-Bertrange and Trier. In combination with archaeological evidence, it was possible to tentatively connect them with specific military units, i.e. the detachments of the Legio VIII Augusta.
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RBINS Staff Publications 2020
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Mode de vie et affinités de Paschaterium (Condylarthra, Hyopsodontidae) d'après ses os du tarse
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Les os du tarse de Paschatherium dolloi de Dormaal sont décrits et analysCs fonctionnellement. L'astragale possède une trochlée en poulie dissymétrique, une large cupule mediale pour la malléole du tibia, un col court. Le calcanéum a un tubercule péronéen bien développé et distal. Les facettes entre les deux os reflètent leur mobilité relative. L'ensemble des caractères indiquent une locomotion rapide, des mouvements de flexion-extension étendus et de fréquentes rotations du pied. Paschatherium est interprété comme un arboricole de type sciuridé. Les comparaisons effectuées avec le Macrocranion de Dormaal et un Hyopsodus nord-am6ricain montrent: des ressemblances partielles entre les astragales de Paschatherium et Macrocranion, probablement dues à des convergences fonctionnelles; une grande similitude des calcanéums de Paschatherium et Hyopsodus, indiquant probablement leur parenté. Nous confirmons le placement de Paschatherium dans les condylarthres hyopsodontidés. Les diff6rences entre les astragales de Paschatherium et Hyopsodus indiquent une divergence adaptative marquée entre les deux genres. Les ressemblances entre l'astragale de Paschatherium et celui des hyracoïdes nous font spéculer sur un possible scénario adaptatif concernant l'origine de ces derniers, scénario qui va à l'encontre du concept de Pantomesaxonia. Avec d'autres caractères. ces ressemblances pourraient suggérer une parenté des hyopsodontidés et des hyracoïdes (et téthythères).
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RBINS Staff Publications
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Model of remote-sensing reflectance including bidirectional effects for case 1 and case 2 waters
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RBINS Staff Publications
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Modeling storm-influenced suspended particulate matter flocculation usin g a tide-wave-combined biomineral model
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RBINS Staff Publications 2018
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Modélisation 3D par imagerie lidar et analyse structurale de la Salle du Dôme des Grottes de Han-sur-Lesse (Belgique, Ardenne)
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RBINS Staff Publications 2020
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Modelling diatom and Phaeocystis blooms and nutrient cycles in the Southern Bight of the North Sea: the MIRO model.
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The link between anthropogenic nutrient loads and the magnitude and extent of diatom and Phaeocystis colony blooms in the Southern Bight of the North Sea was explored with the complex ecosystem model MIRO. The model was adapted for resolving the changing nutrient loads, the complex biology of the bloom species and the tight coupling between the benthic and pelagic compartments that characterise this shallow coastal shelf sea ecosystem. State variables included the main inorganic nutrients (nitrate [NO3], ammonium [NH4], phosphate [PO4] and dissolved silica [DSi]), 3 groups of phytoplankton with different trophic fates (diatoms, nanophytoflagellates and Phaeocystis colonies), 2 zooplankton groups (copepods and microzooplankton), bacteria, and 5 classes of detrital organic matter with different biodegradability. The capability of the MIRO model to properly simulate the observed SW–NE gradient in nutrient enrichment and the seasonal cycle of inorganic and organic C and nutrients, phytoplankton, bacteria and zooplankton in the eastern English Channel and Southern Bight of the North Sea is demonstrated by running the model for the period from 1989 to 1999. The MIRO code was implemented in a simplified multi-box representation of the hydrodynamic regime. These model runs give the first general view of the seasonal dynamics of Phaeocystis colony blooms and nutrient cycling within the domain. C, N and P budget calculations show that (1) the coastal ecosystem has a low nutrient retention and elimination capacity, (2) trophic efficiency of the planktonic system is low, and (3) both are modulated by meteorological forcing.
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Modelling dispersal dynamics of the early life stages of a marine flatfish (Solea solea L.).
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Connectivity throughout the life cycle of flatfish remains an open question, especially during the early life stages. Their effective management requires understanding of how spawning grounds and nurseries are connected and what processes influence larval retention and dispersal. The case of sole (Solea solea L.) is of particular interest because it is one of the most valuable commercial species in the North Sea, although stocks are chronically overexploited and variability in interannual recruitment is high. The transport of sole larvae from the spawning grounds to the nurseries is driven by hydrodynamic processes, but the final dispersal pattern and larval survival/abundance might be influenced by both behavioral and environmental factors. Therefore it is important to understand the relative impact of hydrodynamics, environment, behavior and ecophysiology on sole larval dispersal. Here we use a particle-tracking transport model coupled to a 3D hydro-dynamic model of the North Sea to investigate interannual variability of the transport of sole larvae over a 12-year period (1995–2006). A sensitivity analysis is performed to assess the relative impact of hydrodynamics, temperature and behavior on the recruitment dynamics to the nurseries. Four scenarios have been tested: (i) constant forcing of sea surface temperature during all years but varying meteorological forcing and river runoff, (ii) constant meteorological forcing during the whole period but varying sea surface temperature and river runoff, (iii) no vertical migration and (iv) an extended drift period (max. 30 days) before settlement if the larvae are not close to a suitable sediment type. Results suggest that year-to-year variability of larval supply to the nurseries is high, both in terms of abundance and larval source (balance between retention and dispersal). Sensitivity analysis shows that larval abundance at the end of the larval stage increases considerably if a settling delay is included. The impact of vertical migration on larval transport and the variations in larval retention at the nurseries due to varying meteorological conditions and sea surface temperature forcing are not spatially consistent.
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