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Regional environmental pressure influences population differentiation in turbot (Scophthalmus maximus).
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Unravelling the factors shaping the genetic structure of mobile marine species is challenging due to the high potential for gene flow. However, genetic inference can be greatly enhanced by increasing the genomic, geographical or environmental resolution of population genetic studies. Here, we investigated the population structure of turbot (Scophthalmus maximus) by screening 17 random and gene-linked markers in 999 individuals at 290 geographical locations throughout the northeast Atlantic Ocean. A seascape genetics approach with the inclusion of high-resolution oceanographical data was used to quantify the association of genetic variation with spatial, temporal and environmental parameters. Neutral loci identified three subgroups: an Atlantic group, a Baltic Sea group and one on the Irish Shelf. The inclusion of loci putatively under selection suggested an additional break in the North Sea, subdividing southern from northern Atlantic individuals. Environmental and spatial seascape variables correlated marginally with neutral genetic variation, but explained significant proportions (respectively, 8.7% and 10.3%) of adaptive genetic variation. Environmental variables associated with outlier allele frequencies included salinity, temperature, bottom shear stress, dissolved oxygen concentration and depth of the pycnocline. Furthermore, levels of explained adaptive genetic variation differed markedly between basins (3% vs. 12% in the North and Baltic Sea, respectively). We suggest that stable environmental selection pressure contributes to relatively strong local adaptation in the Baltic Sea. Our seascape genetic approach using a large number of sampling locations and associated oceanographical data proved useful for the identification of population units as the basis of management decisions.
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Species identification of archaeological dung remains. A critical review of possible methods
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Devonian antiarch placoderms from Belgium revisited
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Anatomical, systematic, and paleobiogeographical data on the Devonian antiarchs from Belgium are reviewed, updated and completed thanks to new data from the field and re-examination of paleontological collections. The material of Bothriolepis lohesti Leriche, 1931 is enhanced and the species better described. An undetermined species of Bothriolepis is recorded from the Famennian of Modave (Liège Province), one species of Asterolepis redescribed from the Givetian of Hingeon and another one described from the Givetian of Mazy (Namur Province). Grossilepis rikiki sp. nov. is recorded from the Famennian tetrapod-bearing locality of Strud (Namur Province) and from the Famennian of Moresnet (Liège Province). It is the first occurrence of Grossilepis after the Frasnian and on the central southern coast of the Euramerican continent. Its occurrence in the Famennian of Belgium may be the result of a late arrival from the Moscow Platform and the Baltic Depression, where the genus is known from Frasnian deposits. Remigolepis durnalensis sp. nov. is described from the Famennian of Spontin near Durnal (Namur Province). Except for the doubtful occurrence of Remigolepis sp. in Scotland, this is the first record of this genus in Western Europe. Its occurrence in Belgium reinforces the strong faunal affinities between Belgium and East Greenland and the hypothesis of a hydrographical link between the two areas during the Late Devonian.
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Niphargus : a silicon band-gap sensor temperature logger for high-precision environmental monitoring
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A temperature logger, named “Niphargus”, was developed at the Geological Survey of Belgium to monitor temperature of local natural processes. It has a sensitivity of the order of a few hundredths of degrees on temperature variability in open air, caves, soils and river environment. The newly developed instrument uses a state-of-the-art band-gap silicon temperature sensor with integrated digital output. This sensor reduces the risk of drift associated with thermistor-based sensing devices, especially in humid environments. The Niphargus is designed to be highly reliable, low-cost and powered by a single lithium cell with up to several years autonomy, depending on the sampling rate and environmental conditions. A batch of Niphargus loggers was also compared to a precision thermistor to assess absolute temperature accuracy. Further characterization came from two field case studies in Belgium: monitoring of a mineralized water stream near the town of Spa and air temperature monitoring inside Han-sur-Lesse cave.
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Arlon/Autelbas : consommation et modes de vie à l’abbaye de Clairefontaine d’après les restes biologiques des cuisines (13e-16e siècles)
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Arlon/Autelbas : Etude des restes organiques des latrines de l’abbaye cistercienne de Clairefontaine (18e siècle)
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Burying Dogs in Ancient Cis-Baikal, Siberia: Temporal Trends and Relationships with Human Diet and Subsistence Practices
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The first objective of this study is to examine temporal patterns in ancient dog burials in the Lake Baikal region of Eastern Siberia. The second objective is to determine if the practice of dog burial here can be correlated with patterns in human subsistence practices, in particular a reliance on terrestrial mammals. Direct radiocarbon dating of a suite of the region’s dog remains indicates that these animals were given burial only during periods in which human burials were common. Dog burials of any kind were most common during the Early Neolithic (,7–8000 B.P.), and rare during all other time periods. Further, only foraging groups seem to have buried canids in this region, as pastoralist habitation sites and cemeteries generally lack dog interments, with the exception of sacrificed animals. Stable carbon and nitrogen isotope data indicate that dogs were only buried where and when human diets were relatively rich in aquatic foods, which here most likely included river and lake fish and Baikal seal (Phoca sibirica). Generally, human and dog diets appear to have been similar across the study subregions, and this is important for interpreting their radiocarbon dates, and comparing them to those obtained on the region’s human remains, both of which likely carry a freshwater old carbon bias. Slight offsets were observed in the isotope values of dogs and humans in our samples, particularly where both have diets rich in aquatic fauna. This may result from dietary differences between people and their dogs, perhaps due to consuming fish of different sizes, or even different tissues from the same aquatic fauna. This paper also provides a first glimpse of the DNA of ancient canids in Northeast Asia.
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Holarctic genetic structure and range dynamics in the woolly mammoth
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Ancient DNA analyses have provided enhanced resolution of population histories in many Pleistocene taxa. However, most studies are spatially restricted, making inference of species-level biogeographic histories difficult. Here, we analyse mitochondrial DNA (mtDNA) variation in the woolly mammoth from across its Holarctic range to reconstruct its history over the last 200 thousand years (kyr).We identify a previously undocumented major mtDNA lineage in Europe, which was replaced by another major mtDNA lineage 32–34 kyr before present (BP). Coalescent simulations provide support for demographic expansions at approximately 121 kyr BP, suggesting that the previous interglacial was an important driver for demography and intraspecific genetic divergence. Furthermore, our results suggest an expansion into Eurasia fromAmerica around 66 kyr BP, coinciding with the first exposure of the Bering Land Bridge during the Late Pleistocene. Bayesian inference indicates Late Pleistocene demographic stability until 20–15 kyr BP, when a severe population size decline occurred.
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Complete Mitochondrial Genomes of Ancient Canids Suggest a European Origin of Domestic Dogs
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The geographic and temporal origins of the domestic dog remain controversial, as genetic data suggest a domestication process in East Asia beginning 15,000 years ago, whereas the oldest doglike fossils are found in Europe and Siberia and date to >30,000 years ago. We analyzed the mitochondrial genomes of 18 prehistoric canids from Eurasia and the New World, along with a comprehensive panel of modern dogs and wolves. Themitochondrial genomes of all modern dogs are phylogeneticallymost closely related to either ancient or modern canids of Europe. Molecular dating suggests an onset of domestication there 18,800 to 32,100 years ago. These findings imply that domestic dogs are the culmination of a process that initiated with European hunter-gatherers and the canids with whom they interacted.
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The First Upper Paleolithic Human Remains from Belgium: Aurignacian, Gravettian, and Magdalenian Fossils at the “Troisième caverne” of Goyet
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There is ample evidence of human occupation across Northern Europe throughout various periods of the Upper Paleolithic. However, the biological characteristics of the Northern European Upper Paleolithic humans and their mortuary practices remain largely unknown because of a dearth of human fossils. In Belgium, although the presence of humans has been verified at multiple archeological sites, no Upper Paleolithic fossil has yet been identified. In this context, the recent discovery of Upper Paleolithic human remains at Goyet (Belgium) fills in an important chronological gap. The “Troisième caverne” of Goyet, excavated at the end of the 19th and early 20th century, yielded a rich archeological sequence ranging from the Middle and Upper Paleolithic to historical times. In 2008, we began documenting the Paleolithic occupations of the “Troisième caverne” by reassessing the collections from the site which heretofore had only been partially studied. The updated inventory of human remains was accomplished by conducting a detailed sorting of the paleontological collections in order to identify human remains that may have been overlooked thus far. As a result, the collections from the “Troisième caverne” now include nearly 200 human bones/bone fragments and isolated teeth that correspond to various materials from different periods. The morphometric study of the human specimens from Goyet, completed by direct radiocarbon dating and stable isotope analysis, shows that they represent two main samples—a series of Late Neandertal remains (Rougier et al. 2012) and a set of modern human specimens from three periods of the Upper Paleolithic, namely the Aurignacian, Gravettian, and Magdalenian. The latter include fragmentary elements from the cranial and infracranial skeleton. Interestingly, those from the Gravettian and Magdalenian present anthropogenic traces and ochre traces. We will discuss the importance of these new fossils in the context of the human population of Northern Europe during the Upper Paleolithic.
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