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Extending Our Scientific Reach in Arboreal Ecosystems for Research and Management
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RBINS Staff Publications 2018
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Improving 3D photogrammetry models through spectral imaging: Tooth enamel as a case study
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Reflective or translucent materials are a challenge to digitize in 3D. Results are better with a matt coating although objects from museum collections are often too fragile or too valuable to be treated in this way. It is therefore essential that alternative solutions are found. This study analyzed spectral photogrammetry as a possible solution. Spectral photogrammetry is an emerging technique which uses images at different wavelengths to create 3D models. Tooth enamel is a challenging material to digitize. Six sets of teeth were photographed at different wavelengths. The results showed that the quality of the models enamels parts improved when taken with ultraviolet wavelengths whilst models were less accurate when photogrammetry was performed with the red and infrared spectrum. This can be explained by the optical properties of enamel. This study demonstrates that knowing the optical properties of a material beforehand could help future photogrammetric digitization of challenging materials.
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RBINS Staff Publications 2019
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Early Researchers Involved with Branchiobdellidans (Annelida: Clitellata) on Japanese Crayfish, and a Reassessment of the Taxonomic Status of Branchiobdella digitata Pierantoni, 1906
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RBINS Staff Publications 2020
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Characterization of a West African coastal lagoon system: Case of Lake Nokoué with its inlet (Cotonou, South Benin)
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RBINS Staff Publications 2022
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The World Amphipoda Database: History and Progress
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RBINS Staff Publications 2023 OA
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Checklist of the beetles of Belgium (Coleoptera)
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RBINS Staff Publications 2025
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Issid planthoppers from Bach Ma and Phong Dien in Central Vietnam: (II) Tribe Hemisphaeriini (Hemiptera: Fulgoromorpha: Issidae)
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RBINS Staff Publications 2025
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Adulis and the transshipment of baboons during classical antiquity
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Adulis, located on the Red Sea coast in present-day Eritrea, was a bustling trading centre between the first and seventh centuries CE. Several classical geographers—Agatharchides of Cnidus, Pliny the Elder, Strabo—noted the value of Adulis to Greco-Roman Egypt, particularly as an emporium for living animals, including baboons (Papio spp.). Though fragmentary, these accounts predict the Adulite origins of mummified baboons in Ptolemaic catacombs, while inviting questions on the geoprovenance of older (Late Period) baboons recovered from Gabbanat el-Qurud (‘Valley of the Monkeys’), Egypt. Dated to ca. 800–540 BCE, these animals could extend the antiquity of Egyptian–Adulite trade by as much as five centuries. Previously, Dominy et al. (2020) used stable isotope analysis to show that two New Kingdom specimens of Papio hamadryas originate from the Horn of Africa. Here, we report the complete mitochondrial genomes from a mummified baboon from Gabbanat el-Qurud and 14 museum specimens with known provenance together with published georeferenced mitochondrial sequence data. Phylogenetic assignment connects the mummified baboon to modern populations of P. hamadryas in Eritrea, Ethiopia, and eastern Sudan. This result, assuming geographical stability of phylogenetic clades, corroborates Greco-Roman historiographies by pointing toward present-day Eritrea, and by extension Adulis, as a source of baboons for Late Period Egyptians. It also establishes geographic continuity with baboons from the fabled Land of Punt (Dominy et al., 2020), giving weight to speculation that Punt and Adulis were essentially the same trading centres separated by a thousand years of history.
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RBINS Staff Publications 2023
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Scaling up ocean conservation through recognition of key biodiversity areas in the Southern Ocean from multispecies tracking data
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Biodiversity is critical for maintaining ecosystem function but is threatened by increasing anthropogenic pressures. In the Southern Ocean, a highly biologically productive region containing many endemic species, proactive management is urgently needed to mitigate increasing pressures from fishing, climate change, and tourism. Site-based conservation is one important tool for managing the negative impacts of human activities on ecosystems. The Key Biodiversity Area (KBA) Standard is a standardized framework used to define sites vital for the persistence of global biodiversity based on criteria and quantitative thresholds. We used tracking data from 14 species of Antarctic and subantarctic seabirds and pinnipeds from the publicly available Retrospective Analysis of Antarctic Tracking Data (RAATD) data set to define KBAs for a diverse suite of marine predators. We used track2kba, an R package that supports identification of KBAs from telemetry data through identification of highly used habitat areas and estimates of local abundance within sites. We compared abundance estimates at each site with thresholds for KBA criteria A1, B1, and D1 (related to globally threatened species, individual geographically restricted species, and demographic aggregations, respectively). We identified 30 potential KBAs for 13 species distributed throughout the Southern Ocean that were vital for each individual species, population, and life-history stage for which they were determined. These areas were identified as highly used by these populations based on observational data and complement the ongoing habitat modeling and bioregionalization work that has been used to prioritize conservation areas in this region. Although further work is needed to identify potential KBAs based on additional current and future data sets, we highlight the benefits of utilizing KBAs as part of a holistic approach to marine conservation, given their significant value as a global conservation tool.
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RBINS Staff Publications 2024
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SOOSmap: Your gateway to Antarctic data discovery
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The Southern Ocean is central to global ocean mixing and climate regulation via its disproportionate uptake of human-induced heat and carbon dioxide, yet the underlying processes are still poorly understood. Coordinated and sustained effort in observation and modelling of Southern Ocean processes in the past, present and future is therefore critical for understanding and mitigating the changes underway. Free and equitable access to Southern Ocean data is a fundamental prerequisite to meeting this objective. Here, we present a tool for discovery of, and access to, existing Southern Ocean data—SOOSmap, Version 2 (soosmap.aq). SOOSmap is a gateway to physical, biogeochemical and biological open-access data, free for anyone to use, from ocean science experts to classroom students. SOOSmap was developed in a collaboration of the Southern Ocean Observing System and the European Marine Observations and Data Network Physics project, with the aim to provide an easy to use one-stop-shop for Southern Ocean data held in repositories around the world. In this article, we illustrate the different methods of data access within SOOSmap, describe SOOSmap in the context of other polar data resources and initiatives, demonstrate how SOOSmap can be put into practice by a variety of stakeholders, and instruct users on how they can get involved in the SOOS community and contribute new data to SOOSmap, which is fundamental for this tool to continue to be useful for informing policy and decision-making about changes occurring in the Southern Ocean.
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RBINS Staff Publications 2025
