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Species richness in the African pike Hepsetus: a perfect match between genetics and morphology
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RBINS Staff Publications 2017
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Species turnover between the northern and southern part of the South China Sea in the Elaphropeza Macquart Mangrove fly communities of Hong Kong and Singapore (Insecta: Diptera: Hybotidae)
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No RBINS Staff publications
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Species' traits and taxonomic distance can predict the hatching phenology of ostracod (Crustacea) resting eggs from tropical floodplain lakes
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Freshwater ostracods are commonly found in temporary ponds and lakes, surviving drought periods by producing resting eggs. We investigated the hatching phenology of ostracod resting eggs from the sediments of temporary floodplain lakes, considering both the taxonomic distance between species and their functional traits, such as carapace size (length and height) and shape, valve ornamentation, and reproductive mode. In addition, we tested the hypotheses: (1) that the hatching time is more similar between congeneric ostracod species than between noncongeneric species; (2) that differences in hatching time between congeneric species are often related to differences in functional traits; (3) that both species composition and functional traits composition of hatchlings change over the incubation time, but with a reduction in the variability over time. The experiment was conducted for 98 days in the laboratory, and the microcosms were monitored weekly. The first hatching of an ostracod was recorded during the second week of incubation after hydration of the sediments. A total of 12 ostracod species hatched, belonging to the families Cyprididae and Candonidae. The above three hypotheses were corroborated. The time between inundation and first hatching was mostly similar for congeneric species in the genus Chlamydotheca, but was different between some species of Strandesia, which might be owing to differences in functional traits. The species composition and functional trait composition of the hatched ostracods were significantly different over the 14 weeks of incubation due to the different hatching phenology of different species. Furthermore, our results show that both taxonomic distance and functional traits can influence the hatching time of ostracod resting eggs from temporary floodplain lakes. Thus, future studies addressing the hatching phenology of ostracod resting eggs (and resting stages from other invertebrates) should also emphasize the use of functional traits.
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RBINS Staff Publications 2021
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Species-area relationships are modulated by trophic rank, habitat affinity, and dispersal ability
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RBINS Staff Publications
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Specimen collection: An essential tool
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RBINS Staff Publications
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Spectral relationships for atmospheric correction. II. Improving NASA's standard and MUMM near infra-red modeling schemes.
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RBINS Staff Publications
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Spectral relationships for atmospheric correction. I. Validation of red and near infra-red marine reflectance relationships.
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RBINS Staff Publications
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Spectral variations of light scattering by marine particles in coastal waters, from visible to near infrared
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Field measurements and Mie calculations of the particulate light-scattering coefficient (b(p), in m(-1)) in the near-infrared and visible spectral domains are combined to quantify and model the effect of particulate absorption on the b(p) spectral variations. The case of particles of coastal origin and assumed to follow a Junge-type size distribution is considered. A simple power-law function closely reproduces the near-infrared b(p) spectral variations, with a spectral slope varying in the range 0.1-1.4. In the visible (e.g., 440 nm), particulate absorption effects systematically lead to b(p) values 5-30\% lower than values predicted using a power-law function fitted in the near infrared and extrapolated to 440 nm. The respective influences of the particle size distribution and composition are investigated for both mineral and organic particle populations. Finally, an empirical model derived from theoretical calculations closely reproduces the actual b(p) spectral variations from near-infrared to short visible wavelengths, taking into account particulate absorption effects.
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RBINS Staff Publications
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Speleothem-based chronology and environmental context of deposits from the Mishin Kamik Cave, NW Bulgaria–A contribution to the archaeological study of the Late Pleistocene human occupation in the Balkans
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RBINS Staff Publications 2021
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Sphaeroptica: A tool for pseudo-3D visualization and 3D measurements on arthropods
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Natural history collections are invaluable reference collections. Digitizing these collections is a transformative process that improves the accessibility, preservation, and exploitation of specimens and associated data in the long term. Arthropods make up the majority of zoological collections. However, arthropods are small, have detailed color textures and share small, complex and shiny structures, which poses a challenge to conventional digitization methods. Sphaeroptica is a multi-images viewer that uses a sphere of oriented images. It allows the visualization of insects including their tiniest features, the positioning of landmarks, and the extraction of 3D coordinates for measuring linear distances or for use in geometric morphometrics analysis. The quantitative comparisons show that the measures obtained with Sphaeroptica are similar to the measurements derived from 3D μCT models with an average difference inferior to 1\%, while featuring the high resolution of color stacked pictures with all details like setae, chaetae, scales, and other small and/or complex structures. Shaeroptica was developed for the digitization of small arthropods but it can be used with any sphere of aligned images resulting from the digitization of objects or specimens with complex surface and shining, black, or translucent texture which cannot easily be digitized using structured light scanner or Structure-from-Motion (SfM) photogrammetry.
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RBINS Staff Publications 2024 OA