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Article Reference Gallo‐Roman millstone supply of a hinterland territory limited by the North Sea and the Ardennes: the example of the Macquenoise sandstone (France‐Belgium).
Located in Library / RBINS Staff Publications 2017
Proceedings Reference Gas shales in Belgium?
Located in Library / RBINS Staff Publications
Inproceedings Reference Gastropods as intermediate hosts of feline cardio-pulmonary parasites in Greece: preliminary results
Located in Library / RBINS Staff Publications 2019
Article Reference GBS data confirms past hybridization among congeneric chichlid species from Lake Tanganyika
Located in Library / RBINS Staff Publications 2018
Inproceedings Reference chemical/x-genbank GEN-EX - Metagenomics of Extreme-Wave Events
Located in Library / RBINS Staff Publications 2018
Inproceedings Reference GEN-EX – Metagenomics of Extreme-Wave Events
Extreme-wave events (tsunamis, storm surge and waves) pose significant hazards to coastal communities worldwide. Onshore deposits from these events significantly enhance our understanding of their long-term frequency-magnitude patterns, which are usually not covered by historical and instrumental documentation. Such perspectives are crucial for successful coastal hazard assessments and consequential efforts to mitigate against the loss of life and assets. Methods enabling reliable and consistent differentiation between the sedimentary evidence for tsunamis and storms remain elusive as deposits from both processes share a number of sedimentary criteria. Microfossil approaches (foraminifera, ostracods, diatoms) have yielded promising progress towards conclusive identification (PILARCZYK et al., 2014), however dissolution and bacterial degradation of carbonate tests often prevent microfossil identification. To address this issue in a pioneering project kicked-off in late 2017, we aim at using high-throughput, metagenomic sequencing techniques to identify marine organisms in onshore sand layers from their DNA remains and to unravel cryptic diversities. We focus on foraminifera, single-celled protists, which show depth-related zonation in subtidal environments and have already been traced successfully in palaeo-tsunami deposits by their ancient DNA (SZCZUCIŃSKI et al., 2016), and compare classic and molecular methods for their identification. Three objectives will be followed to reach this goal: 1. Quantify the relationship between water depth and the distribution of different species of foraminifera using both classic assemblage methods and metagenomic approaches. 2. Assess the potential for identifying key indicator species in extreme-wave deposits in different climate settings based on both assemblage approaches and metagenomic high-throughput sequencing techniques; 3. Establish how metagenomic approaches contribute to consistent and reliable differentiation between the sedimentary evidence for storms and tsunamis in coastal settings. The three key field areas, which share an abundance of published, well-dated evidence for both storms and tsunamis, comprise the Shetland Islands, south central Japan, and southern Chile. The Shetland Islands have a temperate oceanic climate, and near-shore lakes and coastal peat lowlands feature sand sheets deposited by the submarine Storegga landslide around 8 ka years ago and a younger tsunami dated to 1.5 ka (e.g. BONDEVIK et al., 2005). Extreme-wave deposits from south central Japan, underlying a subtropical climate, are available through the ongoing BELSPO BRAIN-be-funded QuakeRecNankai project, focusing on records of past earthquakes and tsunamis along the Nankai Trough (GARRETT et al., 2016). At temperate-humid Chaihuin, southern Chile, deposits of the 1960 Chile tsunami and several older events have been documented (HOCKING & GARRETT, 2016) and sampled for identification of foraminiferal assemblages based on DNA remains. REFERENCES BONDEVIK, S., MANGERUD, J., DAWSON, S., DAWSON, A. & LOHNE, Ø. 2005. Evidence for three North Sea tsunamis at the Shetland Islands between 8000 and 1500 years ago. — Quaternary Science Reviews, 24: 1757–1775. GARRETT, E., FUJIWARA, O., GARRETT, P., HEYVAERT, V.M.A., SHISHIKURA, M., YOKOYAMA, Y., HUBERT-FERRARI, A., BRÜCKNER, H., NAKAMURA, A., DE BATIST, M. & THE QUAKERECNANKAI TEAM. 2016. A systematic review of geological evidence for Holocene earthquakes and tsunamis along the Nankai-Suruga Trough, Japan. — Earth-Science Reviews, 159: 337–357. HOCKING, E. & GARRETT, E. 2016. Geological records of recent and historical ruptures of the Chilean subduction zone: a latitudinal transect of earthquake deformation and tsunami inundation. — Geophysical Research Abstracts, 18: EGU2016-938. PILARCZYK, J.E., DURA, T., HORTON, B.P., ENGELHART, S.E., KEMP, A.C. & SAWAI, Y. 2016. Microfossils from coastal environments as indicators of paleo-earthquakes, tsunamis and storms. — Palaeogeography, Palaeoclimatology, Palaeoecology, 413: 144–157. SZCZUCIŃSKI, W., PAWŁOWSKA, J., LEJZEROWICZ, F., NISHIMURA, Y., KOKOCIŃSKI, M., MAJEWSKI, W., NAKAMURA, Y. & PAWLOWSKI, J. 2016. Ancient sedimentary DNA reveals past tsunami deposits. — Marine Geology, 381: 29–33.
Located in Library / RBINS Staff Publications 2017
Inproceedings Reference GEN-EX –Application of metagenomic analyses to extreme wave deposits in the Shetland Islands, UK.
Located in Library / RBINS Staff Publications 2019
Inproceedings Reference GENBAS: Unravelling the genomic basis of speciation in African cichlids from Lake Tanganyika
Located in Library / RBINS Staff Publications
Article Reference General-purpose genotype in the ancient asexual ostracod, Darwinula stevensoni (Crustacea)
Located in Library / RBINS Staff Publications
Article Reference Genetic connectivity of Trematomus fishes in the Southern Ocean
Polar ecosystems harbour a unique cold-adapted biodiversity that is threatened by rapid environmental change and increasing anthropogenic impact. In this context, collecting data on connectivity between populations is essential for supporting conservation management of living resources and ecosystems. Genetic connectivity is the extent to which populations in different parts of a species' geographical range are linked by the exchange of larvae, juveniles or adults (which are the vectors of genetic material). In the Southern Ocean, several Marine Protected Areas (MPAs) – large areas where human activities are restricted or prohibited to promote conservation – are established or under negotiations. Such MPAs are most effective if implemented as a network that considers genetic diversity and connectivity within and between species. In the present study, 607 individuals of ten Trematomus species were sequenced using reduced representation sequencing techniques. Thousands of genomic variants were used to investigate inter- and intraspecific patterns of divergence and connectivity across the Southern Ocean shelf. Population structure analyses of four different species (T. loennbergii, T. eulepidotus, T. scotti and T. newnesi) suggest long- range dispersal across the Weddell Sea and even along the entire West Antarctic coast that might be facilitated by the Weddell Sea Gyre and Antarctic Coastal current. A genetic break at the level of the Filchner Trough was observed in several species. The strong outflow from the Filchner-Ronne ice shelf may separate the trough area from the remaining Weddell Sea habitat. Finally, results suggest that previously undetected cryptic species may be present within both T. eulepidotus and T. loennbergii. Altogether, the present results contribute to the assessment of diversity and connectivity on the Southern Ocean shelf, which is imperative in view of unprecedented global change.
Located in Library / RBINS Staff Publications 2024