Skip to content. | Skip to navigation

Personal tools

You are here: Home
2350 items matching your search terms.
Filter the results.
Item type



































New items since



Sort by relevance · date (newest first) · alphabetically
Article Reference The “Key” to Bringing DNA Collections to the Next Level: A DiSSCo Flanders Working Group Product
The DiSSCo (Distributed System of Scientific Collections) Flanders consortium, with one of the set goals being ``maturing'' (i.e., optimizing the management of) and unlocking (i.e., publishing) their DNA collections, identified 1) the need for actively sharing best practices on the management of DNA collections; and 2) a need for guidance on how to bring theory into practice.During the DiSSCo Flanders project, a DNA collection working group was created. The working group is open to all biodiversity-related DNA collections associates in Belgium, including those in diverse roles such as researchers, lab technicians, collection managers and data managers. Around 50 people from 13 organizations are currently participating. Members can be passively (reading only) or actively (joining events) engaged. The strength, as well as one of the challenges, of the DiSSCo Flanders community is that the natural science collections are created and managed in different organizational contexts: universities, museum institutes and both governmental and non-governmental research organizations. This translates to a variety of collection management decisions and structures such as: decentralized or centralized; cold or room temperature storage; managed by an appointed curator or by a lab technician.The working group organizes meetings and workshops, tours of each other's collections, and shares a mailing list and an online document space. As its principal output, the group has co-created: “The key to bringing DNA collections to the next level” (Veltjen et al. 2024) with two main results: the ``Challenges'' and the “Key”.The ``Challenges'' is a list of 23 challenges applicable to DNA collection management. For example, challenge 8: ``Select or customise collection management systems to meet the needs of DNA collections''. They are intended to spark debate and give focus to the second output: the ``Key.'' The ``Key'' lists seven yes/no questions:Do you have an up-to-date overview of all direct, internal stakeholders of the institute’s DNA collection and are you involving them in the (current) intent to “bring the DNA collection to the next level”?Is preserving a DNA collection within the scope of the institute? And is the DNA collection officially recognized within the institute?Do you have, on paper, a clear description of the scope of the DNA collection?Have you outlined the current overarching workflow of the DNA collection?Have you been able to establish your starting level on the ``DNA collection maturation chart'' and is the assessment properly logged?Level up, one level at a time, and log the process. Have you reached all of the goals in level 3 on the ``DNA collection maturation chart''?Do you have a re-evaluation strategy for your DNA collection?The ``DNA collection maturation chart'' has 11 categories (rows), three levels (columns) and 33 goals (see Table 1 in Veltjen et al. 2024). The Key provides 18 guidance chapters, which give in depth information, literature and user experiences (Suppl. material 2 in Veltjen et al. 2024).The Key is a specialized tool for DNA collections. It facilitates a standardized and holistic approach, allowing both a helicopter view of the maturation process and close-up view of specific goals. The working group aims to test the Key, whereby the process of ``leveling up'' is embedded in a community setting: sharing ambitions, setbacks, changes of plans and success stories. The output is ready in its first version. It is published as a reviewable publication, allowing post-publication peer review (Veltjen et al. 2024). The works are expected to evolve through time, depending on user feedback and user experiences.The working group and co-created output are positive examples of how a local community—sometimes managing smaller, or less conspicuous types of natural science collections—can work together and use their unique perspectives, experiences and needs to contribute to the international natural science collection and biobanking communities.
Located in Library / RBINS Staff Publications 2024
Article Reference infraFADA: Upgrading the taxonomic backbone of global freshwater animal biodiversity research infrastructures
The current Freshwater Animal Diversity Assessment (FADA) comprises an extensive set of global taxa lists for freshwater animal groups. At present, more than 125 thousand described freshwater animal species in more than 11 thousand genera have been documented. However, taxonomy is a living scientific discipline, where new taxa are continuously being described, and existing taxa are being placed in new taxonomic positions. Therefore, after a period of relative inactivity, the BELSPO (Belgian Science Policy) project “infraFADA” (2023-2026) re-establishes the global FADA consortium of taxonomic experts, so that all taxa lists will be brought up to date, both technically and in terms of content. infraFADA will develop a living, updated, and global FADA database, fully in open access and according to the FAIR principles. The infraFADA database is intended for use and consultation by the scientific freshwater community, as well as for interested stakeholders, for example, freshwater ecosystem managers, biodiversity conservationists, and others. Most importantly, FADA will also serve as a taxonomic backbone for other global biodiversity data infrastructures, such as the Catalogue of Life (CoL), the Global Biodiversity Information Facility (GBIF), the Freshwater Information Platform (FIP), and others. As such, FADA will provide a digital and living heritage of freshwater data, building bridges between science and society and helping to sustainably maintain freshwater resources.
Located in Library / RBINS Staff Publications 2024
Inproceedings Reference Integrated taxonomic-taphonomic investigations of a complex late Pleistocene mollusc fauna: a case study from Zeebrugge
Located in Library / RBINS Staff Publications 2024
Inproceedings Reference To colour or not to colour: colour patterns and pigments in invertebrates from the Palaeozoic of Belgium
Almost nothing is known about the evolution of shell colour in invertebrates. This is largely due to the ultra-rarity of fossils in which colour patterns and pigments are preserved and immediately visible, and therefore easy to identify, especially when these are hundreds of millions of years old. This hampers our understanding of the role and function of colour in extinct animals, their ecology, mode of life, interactions, development, and evolution. A good example for this ultra-rarity is the Palaeozoic of Belgium, world-renowned for its exquisitely preserved fossils of the Devonian and Carboniferous, enabling to document major transitions in ecosystem dynamics and the evolution of life on Earth (e.g. nekton revolution, terrestrialisation, major climate changes, anoxic events, biodiversity crises) but from which only a few cephalopod, bivalve and gastropod mollusc and brachiopod shells were historically documented preserving coloured traces (mostly by L.-G. de Koninck and P. de Ryckholt, mid to late 19th century). However, recently, it was discovered that many more specimens preserve these traces, in particular those from Tournaisian–Viséan shallow marine reef environments, allowing to investigate its occurrence in different evolutionary lineages of marine invertebrates exactly during one of the main periods of revolution in geologic history. In Brain project B2/P233/P2 nicknamed COLOURINPALAEO financed by Belspo, after gathering all the specimens available in the main Belgian collections, we use different techniques (multispectral photogrammetry and spectro-imaging) to better visualise the preserved colour patterns and pigments. Furthermore, advanced spectroscopic techniques, namely Raman micro-probe spectroscopy, synchrotron trace elemental mapping and absorption spectroscopy, are used to identify the chemical signature of the pigments as well as their mode and pathways of preservation. Some of the first results on this multidisciplinary study on a unique set of Belgian fossils will be presented.
Located in Library / RBINS Staff Publications 2024
Inproceedings Reference An exceptionally diverse pre-K/Pg boundary nautilid fauna from the Maastrichtian type area (the Netherlands and Belgium).
Located in Library / RBINS Staff Publications 2024
Inproceedings Reference Eric Simon (1948-2018): his contributions to the knowledge of Campanian-Maastrichtian (Late Cretaceous) brachiopods.
Located in Library / RBINS Staff Publications 2024
Inproceedings Reference To colour or not to colour: Colour patterns and pigments in Invertebrates from the Palaeozoic of Belgium.
Almost nothing is known about the evolution of shell colour in invertebrates. This is largely due to the ultra-rarity of fossils in which colour patterns and pigments are preserved and immediately visible, and therefore easy to identify, especially when these are hundreds of millions of years old. This hampers our understanding of the role and function of colour in extinct animals, their ecology, mode of life, interactions, development, and evolution. A good example for this ultra-rarity is the Palaeozoic of Belgium, world-renowned for its exquisitely preserved fossils of the Devonian and Carboniferous, enabling to document major transitions in ecosystem dynamics and the evolution of life on Earth (e.g. nekton revolution, terrestrialisation, major climate changes, anoxic events, biodiversity crises) but from which only a few cephalopod, bivalve and gastropod mollusc and brachiopod shells were historically documented preserving coloured traces (mostly by L.-G. de Koninck and P. de Ryckholt, mid to late 19th century). However, recently, it was discovered that many more specimens preserve these traces, in particular those from Tournaisian–Viséan shallow marine reef environments, allowing to investigate its occurrence in different evolutionary lineages of marine invertebrates exactly during one of the main periods of revolution in geologic history. In Brain project B2/P233/P2 nicknamed COLOURINPALAEO financed by Belspo, after gathering all the specimens available in the main Belgian collections, we will use different techniques (multispectral photogrammetry and spectro-imaging) to better visualise the preserved colour patterns and pigments. Furthermore, advanced spectroscopic techniques, namely Raman micro-probe spectroscopy, synchrotron trace elemental mapping and absorption spectroscopy, will be used to identify the chemical signature of the pigments as well as their mode and pathways of preservation. Some of the first results on this multidisciplinary study on a unique set of Belgian fossils will be presented.
Located in Library / RBINS Staff Publications 2024
Inproceedings Reference Belgian fossil shells as fortune tellers? Unique climate archives yet hardly tapped into
Shells are powerful climate archives - they add growth increments on timescales as short as sub-daily, and often live for decades, some even more than 100 years. With the aid of isotope and trace-elemental geochemistry, the effects of climate change on temperature, seasonality and extreme weather can be read from them. Belgium is one of the few countries blessed with extensive records of exquisitely preserved fossil shells dating to the Pliocene, a geologic period dating from 5.3 to 2.6 million year ago. Critically, the Pliocene is the youngest geologic time during which CO2 levels were >400 ppm and mean annual temperatures comparable to those to be reached by the end of this century, following Shared Socioeconomic Pathways (SSP) 2-4.5 of the IPCC. It therefore presents an ideal near-future analogue. Rich collections of well-preserved Belgian Pliocene shells are in the Royal Belgian Institute of Natural Sciences (RBINS), and more material is collected from temporary outcrops like building sites in and around Antwerp with the aid of citizen-scientists. In recent years, RBINS collaborated with national (VUB, KULeuven) and international (VU Amsterdam, Naturalis, UDerby) researchers to start tapping into these exquisite climate archives, unraveling previously unknown details on Belgian past climate, predicting amplified seasonality in Europe in a warmer world, and investigating the potential of fossil shells to document heat waves and storms. The poster will highlight some of this recent collaborative work, and, why the RBINS, through its collections, fieldwork and expertise can play a pivotal role in climate research in Belgium.
Located in Library / RBINS Staff Publications 2024
Inproceedings Reference PSS V, a modular techno-economic simulation tool for deep subsurface uses
Located in Library / RBINS Staff Publications 2024
Inproceedings Reference Building a regional telescoped model of the Campine Basin for subsurface management
Located in Library / RBINS Staff Publications 2024