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Phylogenomics of Psammodynastes and Buhoma (Elapoidea: Serpentes), with the description of a new Asian snake family
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Asian mock vipers of the genus Psammodynastes and African forest snakes of the genus Buhoma are two genera belonging to the snake superfamily Elapoidea. The phylogenetic placements of Psammodynastes and Buhoma within Elapoidea has been extremely unstable which has resulted in their uncertain and debated taxonomy. We used ultraconserved elements and traditional nuclear and mitochondrial markers to infer the phylogenetic relationships of these two genera with other elapoids. Psammodynastes, for which a reference genome has been sequenced, were found, with strong branch support, to be a relatively early diverging split within Elapoidea that is sister to a clade consisting of Elapidae, Micrelapidae and Lamprophiidae. Hence, we allocate Psammodynastes to its own family, Psammodynastidae new family. However, the phylogenetic position of Buhoma could not be resolved with a high degree of confidence. Attempts to identify the possible sources of conflict in the rapid radiation of elapoid snakes suggest that both hybridisation/introgression during the rapid diversification, including possible ghost introgression, as well as incomplete lineage sorting likely have had a confounding role. The usual practice of combining mitochondrial loci with nuclear genomic data appears to mislead phylogeny reconstructions in rapid radiation scenarios, especially in the absence of genome scale data.
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RBINS Staff Publications 2024
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A note on the genus Rugosophysis Komiya & Drumont, 2008 (Contribution to the knowledge of Indonesian Prioninae - 1) (Coleoptera, Cerambycidae, Prioninae)
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RBINS Staff Publications 2024
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From depressed to detached: extreme shell shape variation in some Peruvian Bostryx species (Gastropoda: Bulimulidae)
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RBINS Staff Publications 2024
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Lessons from assembling UCEs: A comparison of common methods and the case of Clavinomia (Halictidae)
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RBINS Staff Publications 2024
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Salvation and documentation: additional (probable) type material of South American land-snail species (Gastropoda, Stylommatophora) in the Museum für Naturkunde Berlin
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RBINS Staff Publications 2024
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L’épopée du « Travailleur » et du « Talisman » de 1880 à 1883
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RBINS Staff Publications 2024
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Glacial melt impacts carbon flows in an Antarctic benthic food web.
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Most coastal glaciers on the West Antarctic Peninsula are in retreat. Glacial ice scouring and lithogenic particle runoff increase turbidity and shape soft sediment benthic communities. This, in turn, has the potential to induce a shift in these systems from an autotrophic to a heterotrophic state. In this study, we investigated the influence of glacial runoff on carbon flows in the softsediment food web of Potter Cove, a well-studied shallow fjord located in the northern region of the West Antarctic Peninsula. We constructed linear inverse food web models using a dataset that includes benthic carbon stocks as well as carbon production and respiration rates. The dataset offers detailed spatial information across three locations and seasonal variations spanning three seasons, reflecting different degrees of disturbance from glacial melt runoff. In these highly resolved food web models, we quantified the carbon flows from various resource compartments (phytoplankton detritus, macroalgae, microphytobenthos, sediment detritus) to consumers (ranging from prokaryotes to various functional groups in meio- and macrofauna). Locations and seasons characterized by high glacial melt runoff exhibited distinct patterns of carbon flow compared to those with low glacial melt runoff. This difference was primarily driven by a less pronounced benthic primary production pathway, an impaired microbial loop and a lower secondary production of the dominant bivalve Aequiyoldia eightsii and other infauna in the location close to the glacier. In contrast, the bivalve Laternula elliptica and meiofauna had the highest secondary production close to the glacier, where they are exposed to high glacial melt runoff. This study shows how the effects of glacial melt propagate from lower to higher trophic levels, thereby affecting the transfer of energy in the ecosystem.
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RBINS Staff Publications 2024
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Cranial morphology of Khirtharia inflata (Raoellidae, Artiodactyla)
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Raoellidae are extinct small-sized semiaquatic artiodactyls that are the closest relatives to crown clade Cetacea. They display morphological features showing the transition between terrestrial and aquatic lifestyles and therefore bring crucial information to understand the earliest steps of cetacean evolution. Raoellid cranial morphology, including the ear region and endocranial morphology, has been documented using cranial remains referred to Indohyus indirae from the Kalakot area, Jammu and Kashmir in India. The study of these specimens highlighted that several cetacean features are already present in raoellids. The previously available Indohyus material was very deformed, preventing access to quantitative data and leading to potential misinterpretations. We describe new undeformed cranial material from the Kalakot area, documenting another raoellid species, Khirtharia inflata. The new observations allow us to complete our knowledge of raoellid cranial morphology, including the original shape of the cranium and brain endocast and to confirm the specificities of raoellid morphology within Artiodactyla. We further provide the first quantitative data for the different brain components and show that Raoellidae had low encephalization and neocorticalization values, much lower than cetaceans and close to early diverging, primitive, dichobunoid artiodactyls. Reconstruction of the blood sinuses above the cerebellum supports the previous “intraosseous” hypothesis about the initial steps of the development of the caudal venous rete mirabile in cetaceans. The presence of several cetacean cranial features in Raoellidae, such as the peculiar shape of the frontal, the strong postorbital constriction, the periotic involucrum, or the elongation of the olfactory bulbs, questions the definition of the Cetacea clade.
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RBINS Staff Publications 2023 OA
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A database of threat statuses and life-history traits of Red List species in Flanders (northern Belgium)
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Red Lists estimate the extinction risk of species at global or regional levels and are important instruments in conservation policies. Global Red List assessments are readily available via the IUCN website (https://www.iucnredlist.org) and are regularly updated by (taxonomic) experts. Regional Red Lists, however, are not always easy to find and often use local criteria to assess the local extinction risk of species.
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RBINS Staff Publications 2019
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Diversity of Ants and Termites of the Botanical Garden of the University of Lomé, Togo
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Ants and termites are used as bioindicators in many ecosystems. Little knowledge is available about them in Togo, especially ants. This study aimed to find out how ants and termites could be used to assess the restoration of former agricultural land. These insect groups were sampled within six transects of 50 × 2 m2 (using pitfall traps, monoliths, baits for ants and hand sampling for termites) in two consecutive habitats: open area (grassland) and covered area (an artificial forest). Seventeen termite species and 43 ant species were collected. Seven ant species were specific to the covered area against four for the open area, while four unshared species of termite were found in the open area against three in the covered area. The presence of unshared species was linked to vegetation, as Trinervitermes (Holmgren, 1912), a grass feeding termite, was solely found in open area. Also, for some ant species like Cataulacus traegaordhi (Santschi, 1914), Crematogaster (Lund, 1831) species, Oecophylla longinoda (Latreille, 1802) and Tetraponera mocquerysi (Brown, 1960), all arboreal species, vegetation was a determining factor for their presence. The occurrence of these species together with Basidentitermes mactus (Sjöstedt, 1911), Strumigenys bernardi (Brown, 1960) and S. sistrura (Bolton, 1983), suggest a more advanced level of restoration of the covered area.
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RBINS Staff Publications 2019