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Article Reference European Journal of Taxonomy. A success story en pleidooi voor ondersteuning op het vlak van institutionele publicatie.
Located in Library / RBINS Staff Publications 2017
Article Reference Updating Frasnian miospore zonation from the Boulonnais (Northern France) and comparison with new data from the Upper Palaeozoic cover on the Brabant Massif (Western Belgium).
Located in Library / RBINS Staff Publications 2021
Article Reference Protected yet unmanaged: insights into the ecological status of conservation priority stony reefs in Belgian waters based on the integrative use of remote sensing technologies
Stony reefs are ecologically important, providing irreplaceable ecosystem services. These fragile environments are recognised as conservation priorities by all relevant global and European policies. Bottom-contacting fi sheries are an important source of anthropogenic disturbance to the sea fl oor ’ s physical and ecological integrity having immediate and destructive consequences on stony reefs and compromising ecological functions. This study, aimed to assess the ecological status (community composition and functions) of two stony reef areas -Northwest and Hinder Banks study sites -in Belgian waters using multiple remote sensing tools. Insights on the study sites ’ geomorphological context and fi shing patterns were gained using echo-sounding and publicly available satellite data. Video-based benthic community data were assessed against the exposure to fi shing pressure using a trait-based approach linked to the biotas ’ resistance and recovery potential. In the Northwest study site, between 2019 and 2022 there was a signi fi cant decline in the abundance of benthic species classi fi ed with low resistance and recovery potential to trawling. Conversely, there was a notable increase in species with moderate scores. During the same period, this site experienced an eight-fold increase in fi shing effort and the hydroacoustic data revealed the presence of several trawl-marks in 2022. Similar changes in benthic communities were observed in the Hinder Banks too. Here, the abundance of species with low resistance and recovery potential was signi fi cantly lower in locations that were geomorphologically exposed to trawling compared to sheltered ones. Exposed locations had a higher abundance of opportunistic species, with moderate to high scores. The presence of several trawl marks on the sea fl oor was observed in the exposed locations, corresponding to fi shing hotspots identi fi ed in the satellite data. Trawling activities marginally impacted richness and total abundance, but negatively altered benthic functional composition. The fi ndings of this study provide scienti fi c evidence of the detrimental impact of bottom-contacting fi sheries on conservation priority biotopes and argues against the coexistence of such activities with Marine Protected Areas. The results of our investigation are of interest to environmental managers for the adequate implementation of environmental legislation in the face of rapid and widespread anthropogenic changes.
Located in Library / RBINS Staff Publications 2023
Article Reference SEADETECT: developing an automated detection system to reduce whale-vessel collision risk
With the continuous intensification of marine traffic worldwide, whale-vessel collisions at sea (or “ship strikes”) have become one of the primary causes of mortality for cetaceans and a widely recognised cause of concern for human safety and economic losses. The Mediterranean Sea is a global hotspot for whale-vessel collisions, with one of the highest rates involving large cetaceans, especially the endangered fin whales (Balaenoptera physalus) and sperm whales (Physeter macrocephalus). Evidence indicates that both species are experiencing higher chances of a fatal collision than what predictions have estimated so far, with ship strikes being the main human-induced threat in the area. Regional and international organisations have stressed the need to address the issue by investigating the projected impacts of ship strikes on whale populations and by identifying possible mitigation measures to reduce chances of collision. Amongst the most popular and feasible options, there is the improvement of animal detection during navigation. Here, we present SEADETECT, a LIFE project that aims at developing an automated detection system to reduce vessel collision risk with marine mammals and unidentified floating objects (UFOs), combining state-of-the-art and novel technologies with existing approaches in the study of large whale ecology. This detection system consists of three elements; an automated onboard detection system composed of several sensors, a real- time passive acoustic monitoring (PAM) network at sea and a real-time detection-sharing and alert system (REPCET®). In this paper, we propose the development of a mitigation measure framework tailored for the issue of collision with fin and sperm whales in the north-western Mediterranean Sea, but that has the transferability features necessary for its application in other high-risk areas for ship strikes worldwide.
Located in Library / RBINS Staff Publications 2023
Article Reference Investigating Infectious Organisms of Public Health Concern Associated with Wild Meat
Located in Library / RBINS Staff Publications 2023 OA
Article Reference SARS-CoV-2 Surveillance between 2020 and 2021 of All Mammalian Species in Two Flemish Zoos (Antwerp Zoo and Planckendael Zoo)
Located in Library / RBINS Staff Publications 2023 OA
Article Reference Assessment of PRISMA water reflectance using autonomous hyperspectral radiometry
Hyperspectral remote sensing reflectance (Rrs) derived from PRISMA in the visible and infrared range was evaluated for two inland and coastal water sites using above-water in situ reflectance measurements from autonomous hyper- and multispectral radiometer systems. We compared the Level 2D (L2D) surface reflectance, a standard product distributed by the Italian Space Agency (ASI), as well as outputs from ACOLITE/DSF, now adapted for processing of PRISMA imagery. Near-coincident Sentinel-3 OLCI (S3/OLCI) observations were also compared as it is a frequent data source for inland and coastal water remote sensing applications, with a strong calibration and validation record. In situ measurements from two optically diverse sites in Italy, equipped with fixed autonomous hyperspectral radiometer systems, were used: the REmote Sensing for Trasimeno lake Observatory (RESTO), positioned in a shallow and turbid lake in Central Italy, and the Acqua Alta Oceanographic Tower (AAOT), located 15 km offshore from the lagoon of Venice in the Adriatic Sea, which is characterised by clear to moderately turbid waters. 20 PRISMA images were available for the match-up analysis across both sites. Good performance of L2D was found for RESTO, with the lowest relative (Mean Absolute Percentage Difference, MAPD  25\%) and absolute errors (Bias  0.002) in the bands between 500 and 680 nm, with similar performance for ACOLITE. The lowest median and interquartile ranges of spectral angle (SA  8°) denoted a more similar shape to the RESTO in situ data, indicating pigment absorption retrievals should be possible. ACOLITE showed better statistical performance at AAOT compared to L2D, providing R2  0.5, Bias  0.0015 and MAPD  35\%, in the range between 470 and 580 nm, i.e. in the spectral range with highest reflectances. The addition of a SWIR based sun-glint correction to the default atmospheric correction implemented in ACOLITE further improved performance at AAOT, with lower uncertainties and closer spectral similarity to the in situ measurements, suggesting that ACOLITE with glint correction was able to best reproduce the spectral shape of in situ data at AAOT. We found good results for PRISMA Rrs retrieval in our study sites, and hence demonstrated the use of PRISMA for aquatic ecosystem mapping. Further studies are needed to analyse performance in other water bodies, over a wider range of optical properties.
Located in Library / RBINS Staff Publications 2022
Article Reference QWIP: A Quantitative Metric for Quality Control of Aquatic Reflectance Spectral Shape Using the Apparent Visible Wavelength
The colors of the ocean and inland waters span clear blue to turbid brown, and the corresponding spectral shapes of the water-leaving signal are diverse depending on the various types and concentrations of phytoplankton, sediment, detritus and colored dissolved organic matter. Here we present a simple metric developed from a global dataset spanning blue, green and brown water types to assess the quality of a measured or derived aquatic spectrum. The Quality Water Index Polynomial (QWIP) is founded on the Apparent Visible Wavelength (AVW), a one-dimensional geophysical metric of color that is inherently correlated to spectral shape calculated as a weighted harmonic mean across visible wavelengths. The QWIP represents a polynomial relationship between the hyperspectral AVW and a Normalized Difference Index (NDI) using red and green wavelengths. The QWIP score represents the difference between a spectrum’s AVW and NDI and the QWIP polynomial. The approach is tested extensively with both raw and quality controlled field data to identify spectra that fall outside the general trends observed in aquatic optics. For example, QWIP scores less than or greater than 0.2 would fail an initial screening and be subject to additional quality control. Common outliers tend to have spectral features related to: 1) incorrect removal of surface reflected skylight or 2) optically shallow water. The approach was applied to hyperspectral imagery from the Hyperspectral Imager for the Coastal Ocean (HICO), as well as to multispectral imagery from the Visual Infrared Imaging Radiometer Suite (VIIRS) using sensor-specific extrapolations to approximate AVW. This simple approach can be rapidly implemented in ocean color processing chains to provide a level of uncertainty about a measured or retrieved spectrum and flag questionable or unusual spectra for further analysis.
Located in Library / RBINS Staff Publications 2022
Article Reference 33 million year old Myotis (Chiroptera, Vespertilionidae) and the rapid global radiation of modern bats
The bat genus Myotis is represented by 120+ living species and 40+ extinct species and is found on every continent except Antarctica. The time of divergence of Myotis has been contentious as has the time and place of origin of its encompassing group the Vespertilionidae, the most diverse (450+ species) and widely distributed extant bat family. Fossil Myotis species are common, especially in Europe, beginning in the Miocene but earlier records are poor. Recent study of new specimens from the Belgian early Oligocene locality of Boutersem reveals the presence of a relatively large vespertilionid. Morphological comparison and phylogenetic analysis confirms that the new, large form can be confidently assigned to the genus Myotis, making this record the earliest known for that taxon and extending the temporal range of this extant genus to over 33 million years. This suggests that previously published molecular divergence dates for crown myotines (Myotis) are too young by at least 7 million years. Additionally, examination of first fossil appearance data of 1,011 extant placental mammal genera indicates that only 13 first occurred in the middle to late Paleogene (48 to 33 million years ago) and of these, six represent bats, including Myotis. Paleogene members of both major suborders of Chiroptera (Yangochiroptera and Yinpterochiroptera) include extant genera indicating early establishment of successful and long-term adaptive strategies as bats underwent an explosive radiation near the beginning of the Early Eocene Climatic Optimum in the Old World. A second bat adaptive radiation in the New World began coincident with the Mid-Miocene Climatic Optimum.
Located in Library / RBINS Staff Publications 2017
Article Reference Changes in chlorophyll concentration and phenology in the North Sea in relation to de‐eutrophication and sea surface warming
At least two major drivers of phytoplankton production have changed in recent decades in the North Sea: sea surface temperature (SST) has increased by ~ 1.6°C between 1988 and 2014, and the nitrogen and phosphorus loads from surrounding rivers have decreased from the mid‐1980s onward, following reduction policies. Long time series spanning four decades (1975–2015) of nutrients, chlorophyll (Chl), and pH measurements in the Southern and Central North Sea were analyzed to assess the impact of both the warming and the de‐eutrophication trends on Chl. The de‐eutrophication process, detectable in the reduction of nutrient river loads to the sea, caused a decrease of nutrient concentrations in coastal waters under riverine influence. A decline in annual mean Chl was observed at 11 out of 18 sampling sites (coastal and offshore) in the period 1988–2016. Also, a shift in Chl phenology was observed around 2000, with spring bloom formation occurring earlier in the year. A long time series of pH in the Southern North Sea showed an increase until the mid‐1980s followed by a rapid decrease, suggesting changes in phytoplankton production that would support the observed changes in Chl. Linear correlations, however, did not reveal significant relationships between Chl variability and winter nutrients or SST at the sampling sites. We propose that the observed changes in Chl (annual or seasonal) around 2000 are a response of phytoplankton dynamics to multiple stressors, directly or indirectly influenced by de‐eutrophication and climate warming.
Located in Library / RBINS Staff Publications 2019