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Article Reference Ancient asexual scandals
Located in Library / RBINS Staff Publications
Article Reference Ancient asexual scandals (letter)
Located in Library / RBINS Staff Publications
Article Reference Ancient asexuals
Located in Library / RBINS Staff Publications
Article Reference Ancient asexuals and time frames
Located in Library / RBINS Staff Publications
Article Reference Ancient asexuals: darwinulids not exposed!
Located in Library / RBINS Staff Publications
Article Reference Ancient breeds of domestic fowl (Gallus gallus f. domestica) distinguished on the basis of traditional observations combined with mixture analysis
Using a large assemblage of domestic fowl bones from a classical site, a methodology is presented that allows the recognition of breeds. The approach differs from previous research in which tarsometatarsi were used exclusively. In the present paper, frequency histograms of long bone lengths and mixture analysis were combined with observations on medullary bone development. By concentrating on the analysis of bones with medullary bone, only the securely sexed part of the population (the females) is considered, thereby avoiding problems related to the use of spur development in tarsometatarsi. Three breeds of different sizes could be recognized, of which the smallest shows a high incidence of spurred females.
Located in Library / RBINS Staff Publications
Article Reference Ancient DNA reveals lack of postglacial habitat tracking in the arctic fox
How species respond to an increased availability of habitat, for example at the end of the last glaciation, has been well established. In contrast, little is known about the opposite process, when the amount of habitat decreases. The hypothesis of habitat tracking predicts that species should be able to track both increases and decreases in habitat availability. The alternative hypothesis is that populations outside refugia become extinct during periods of unsuitable climate. To test these hypotheses, we used ancient DNA techniques to examine genetic variation in the arctic fox (Alopex lagopus) through an expansion/contraction cycle. The results show that the arctic fox in midlatitude Europe became extinct at the end of the Pleistocene and did not track the habitat when it shifted to the north. Instead, a high genetic similarity between the extant populations in Scandinavia and Siberia suggests an eastern origin for the Scandinavian population at the end of the last glaciation. These results provide new insights into how species respond to climate change, since they suggest that populations are unable to track decreases in habitat availability. This implies that arctic species may be particularly vulnerable to increases in global temperatures. © 2007 by The National Academy of Sciences of the USA.
Located in Library / RBINS Staff Publications
Article Reference Ancient DNA suggests modern wolves trace their origin to a Late Pleistocene expansion from Beringia
Located in Library / RBINS Staff Publications 2019
Article Reference Ancient DNA suggests modern wolves trace their origin to a Late Pleistocene expansion from Beringia
Grey wolves (Canis lupus) are one of the few large terrestrial carnivores that have maintained a wide geographical distribution across the Northern Hemisphere throughout the Pleistocene and Holocene. Recent genetic studies have suggested that, despite this continuous presence, major demographic changes occurred in wolf populations between the Late Pleistocene and early Holocene, and that extant wolves trace their ancestry to a single Late Pleistocene population. Both the geographical origin of this ancestral population and how it became widespread remain unknown. Here, we used a spatially and temporally explicit modelling framework to analyse a data set of 90 modern and 45 ancient mitochondrial wolf genomes from across the Northern Hemisphere, spanning the last 50,000 years. Our results suggest that contemporary wolf populations trace their ancestry to an expansion from Beringia at the end of the Last Glacial Maximum, and that this process was most likely driven by Late Pleistocene ecological fluctuations that occurred across the Northern Hemisphere. This study provides direct ancient genetic evidence that long‐range migration has played an important role in the population history of a large carnivore, and provides insight into how wolves survived the wave of megafaunal extinctions at the end of the last glaciation. Moreover, because Late Pleistocene grey wolves were the likely source from which all modern dogs trace their origins, the demographic history described in this study has fundamental implications for understanding the geographical origin of the dog.
Located in Library / RBINS Staff Publications 2020
Article Reference Ancient pigs reveal a near-complete genomic turnover following their introduction to Europe.
Archaeological evidence indicates that pig domestication had begun by ∼10,500 y before the present (BP) in the Near East, and mitochondrial DNA (mtDNA) suggests that pigs arrived in Europe alongside farmers ∼8,500 y BP. A few thousand years after the introduction of Near Eastern pigs into Europe, however, their characteristic mtDNA signature disappeared and was replaced by haplotypes associated with European wild boars. This turnover could be accounted for by substantial gene flow from local European wild boars, although it is also possible that European wild boars were domesticated independently without any genetic contribution from the Near East. To test these hypotheses, we obtained mtDNA sequences from 2,099 modern and ancient pig samples and 63 nuclear ancient genomes from Near Eastern and European pigs. Our analyses revealed that European domestic pigs dating from 7,100 to 6,000 y BP possessed both Near Eastern and European nuclear ancestry, while later pigs possessed no more than 4\% Near Eastern ancestry, indicating that gene flow from European wild boars resulted in a near-complete disappearance of Near East ancestry. In addition, we demonstrate that a variant at a locus encoding black coat color likely originated in the Near East and persisted in European pigs. Altogether, our results indicate that while pigs were not independently domesticated in Europe, the vast majority of human-mediated selection over the past 5,000 y focused on the genomic fraction derived from the European wild boars, and not on the fraction that was selected by early Neolithic farmers over the first 2,500 y of the domestication process.
Located in Library / RBINS Staff Publications 2019