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Article Reference Using Sea cucumbers to illustrate the basics of zoological nomenclature
Located in Library / RBINS Staff Publications
Article Reference First record of the Apodid Sea Cucumber Anapta gracilis Semper, 1868 (Holothuroidea: Synaptidae) in the Gulf of Thailand.
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Located in Library / RBINS Staff Publications
Article Reference no Name, No Game
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Located in Library / RBINS Staff Publications
Article Reference Algal Taxonomy: a road to nowhere?
The widespread view of taxonomy as an essentially retrogressive and outmoded science unable to cope with the current biodiversity crisis stimulated us to analyze the current status of cataloguing global algal diversity. Contrary to this largely pessimistic belief, species description rates of algae through time and trends in the number of active taxonomists, as revealed by the web resource AlgaeBase, show a much more positive picture. More species than ever before are being described by a large community of algal taxonomists. The lack of any decline in the rate at which new species and genera are described, however, is indicative of the large proportion of undiscovered diversity and bears heavily on any prediction of global algal species diversity and the time needed to catalogue it. The saturation of accumulation curves of higher taxa (family, order, and classes) on the other hand suggest that at these taxonomic levels most diversity has been discovered. This reasonably positive picture does not imply that algal taxonomy does not face serious challenges in the near future. The observed levels of cryptic diversity in algae, combined with the shift in methods used to characterize them, have resulted in a rampant uncertainty about the status of many older species. As a consequence, there is a tendency in phycology to move gradually away from traditional names to a more informal system whereby clade-, specimen- or strain-based identifiers are used to communicate biological information. Whether these informal names for species-level clades represent a temporary situation stimulated by the lag between species discovery and formal description, or an incipient alternative or parallel taxonomy, will be largely determined by how well we manage to integrate historical collections into modern taxonomic research. Additionally, there is a pressing need for a consensus about the organizational framework to manage the information about algal species names. An eventual strategy should preferably come out of an international working group that includes the various databases as well as the various phycological societies. In this strategy, phycologists should link up to major international initiatives that are currently being developed, such as the compulsory registration of taxonomic and nomenclatural acts and the introduction of Life Science Identifiers.
Located in Library / RBINS Staff Publications
Article Reference The rediscovery of a collection of echinoderms, including two holotypes, in the Durban Natural Science Museum, South Africa.
This paper reports on an orphaned collection of echinoderms housed at the Durban Natural Science Museum, South Africa. The collection includes holotypes of the South African endemic ophiuroid Asteroschema capensis Mortensen, 1925 [=Asteromorpha capensis (Mortensen, 1925)] according to Okanishi et al. (2013) and the South African endemic asteroid Anthenoides marleyi Mortensen, 1925. The holotype of the asteroid Hacelia superba var. capensis Mortensen, 1925 has not been found and is considered lost, whilst the holotype of Anthosticte pacei Mortensen, 1925 [=Tethyaster pacei (Mortensen, 1925)] is reported to be housed in the Zoological Museum Copenhagen, Denmark. The collection includes both wet and dry specimens of extant Asteroidea, Ophiuroidea, Echinoidea and Holothuroidea with Crinoidea being absent. Holothuroidea were excluded from examinations due to lack of locality data. In addition, Plococidaris verticillata (de Lamarck, 1816) is a new distribution record for South Africa. This paper gives new accession numbers of the specimens and the only photographic record of this collection.
Located in Library / RBINS Staff Publications
Article Reference New or noteable records of brittle stars (Echinodermata: Ophiuroidea) from South Africa.
Ophiuroid research in South Africa has not kept pace with global taxonomic research with the last major taxonomic review of the group being published in 1976. This paper documents all new records of Ophiuroidea from South Africa since (and including) 1977. These records originate from specimens housed in five zoological collections, from photographic records and from reports published in the non-taxonomic literature. A short review of the history of ophiuroid taxonomy in South Africa is also given and for each new record, key references, distribution, ecology, additional notes and, where possible, photographs, are presented. This has resulted in an additional 24 species being recorded within the mainland Exclusive Economic Zone of South Africa, elevating the total known number of ophiuroid species reported in the region to 137.
Located in Library / RBINS Staff Publications
Inbook Reference De evolutie van evolutiedenken: van Aristotles tot de moderne synthese
Located in Library / RBINS Staff Publications
Article Reference Sex in the city: uncovering sex-specific management of equine resources from prehistoric times to the modern period in France
Sex identification from fragmentary archeozoological assemblages is particularly challenging in the Equid family, including for horses, donkeys and their hybrids. This limitation has precluded in-depth investigations of sex-ratio variation in various temporal, geographic and social contexts. Recently, shallow DNA sequencing has offered an economical solution to equine sex determination, even in environments where DNA preservation conditions is not optimal. In this study, we applied state-of-the-art methods in ancient DNA-based equine sex determination to 897 osseous remains in order to assess whether equal proportions of males and females could be found in a range of archeological contexts in France. We found Magdalenian horse hunt not focused on isolated bachelors, and Upper Paleolithic habitats and natural traps equally balancing sex ratios. In contrast, Iron Age sacrificial rituals appeared to have been preferentially oriented to male horses and this practice extended into the Roman Period. During Antiquity, the Middle Ages and the Modern Period, cities emerged as environments largely dominated by horse males. This strong sex-bias was considerably reduced, and sometimes even absent, in various rural contexts. Combined with previous archaeozoological work and textual evidence, our results portray an urban economy fueled by adult, often old, males, and rural environments where females and subadults of both sexes were maintained to sustain production demands.
Located in Library / RBINS Staff Publications 2022
Article Reference Historical management of equine resources in France from the Iron Age to the Modern Period
Alongside horses, donkeys and their first-generation hybrids represent members of the Equidae family known for their social, economic and symbolic importance in protohistoric and historical France. However, their relative importance and their respective roles in different regions and time periods are difficult to assess based on textual, iconographic and archaeological evidence. This is both due to incomplete, partial and scattered historical sources and difficulties to accurately assign fragmentary archaeological remains at the proper taxonomic level. DNA- based methods, however, allow for a robust identification of the taxonomic status of ancient equine osseous material from minimal sequence data. Here, we leveraged shallow ancient DNA sequencing and the dedicated Zonkey computational pipeline to obtain the first baseline distribution for horses, mules and donkeys in France from the Iron Age to the Modern period. Our collection includes a total of 873 ancient specimens spanning 128 ubiquitous and the most dominant species identified, our dataset reveals the importance of mule breeding during Roman times, especially between the 1st and 3rd centuries CE (Common Era), where they represented between 20.0% and 34.2% of equine assemblages. In contrast, donkeys were almost absent from northern France as-semblages during the whole Roman period, but replaced mules in rural and urban commercial and economic centers from the early Middle Ages. Our work also identified donkeys of exceptional size during Late Antiquity, which calls for a deep reassessment of the true morphological space of past equine species. This study confirmed the general preference toward horses throughout all time periods investigated but revealed dynamic manage-ment strategies leveraging the whole breadth of equine resources in various social, geographic and temporal contexts.
Located in Library / RBINS Staff Publications 2021
Inproceedings Reference Taphonomy of the Pisco Konzentrat- and Konservat-Lagerstätte (Miocene, Peru).
Among the most outstanding Cenozoic marine Fossil-Lagerstätten worldwide, the Peruvian Pisco Formation is renowned for its exceptional preservation and abundance of fossil vertebrates, especially cetaceans. We present an updated overview and interpretation of taphonomic data gathered during fifteen field campaigns (2006-2019) on 890 fossil marine vertebrates from the Miocene strata of the Pisco Formation exposed in the Ica Desert. In order to assess the factors that led to the formation of such an exceptional Konzentrat- and Konservat-Lagerstätte, we made observations that range from the taxonomic distribution, articulation, completeness, disposition and orientation of skeletons, to the presence of bite marks, associations with shark teeth and macro-invertebrates, bone and soft tissue (i.e., baleen) preservation, and the formation of attendant carbonate concretions and sedimentary structures. We propose that the exceptional preservation and abundance of the Pisco Formation specimens cannot be ascribed to a single cause, but rather to the interplay of favorable palaeoenvironmental factors and suitable timing of mineralizing processes, such as: i) low concentration of dissolved oxygen at the seafloor; ii) the early onset of mineralization processes; iii) rapid burial of the carcasses; and iv) original biological richness in the southeastern Pacific. Our observations provide a comprehensive overview of the taphonomic characteristics of one of the most significant fossiliferous deposits of South America and lead to the elaboration of a complex scenario for the preservation of its marine vertebrates that might serve as a reference for explaining the formation of other marine vertebrate Fossil-Lagerstätten worldwide.
Located in Library / RBINS Staff Publications 2021