Archaeological evidence indicates that pig domestication had begun by ∼10,500 y before the present (BP) in the Near East, and mitochondrial DNA (mtDNA) suggests that pigs arrived in Europe alongside farmers ∼8,500 y BP. A few thousand years after the introduction of Near Eastern pigs into Europe, however, their characteristic mtDNA signature disappeared and was replaced by haplotypes associated with European wild boars. This turnover could be accounted for by substantial gene flow from local European wild boars, although it is also possible that European wild boars were domesticated independently without any genetic contribution from the Near East. To test these hypotheses, we obtained mtDNA sequences from 2,099 modern and ancient pig samples and 63 nuclear ancient genomes from Near Eastern and European pigs. Our analyses revealed that European domestic pigs dating from 7,100 to 6,000 y BP possessed both Near Eastern and European nuclear ancestry, while later pigs possessed no more than 4\% Near Eastern ancestry, indicating that gene flow from European wild boars resulted in a near-complete disappearance of Near East ancestry. In addition, we demonstrate that a variant at a locus encoding black coat color likely originated in the Near East and persisted in European pigs. Altogether, our results indicate that while pigs were not independently domesticated in Europe, the vast majority of human-mediated selection over the past 5,000 y focused on the genomic fraction derived from the European wild boars, and not on the fraction that was selected by early Neolithic farmers over the first 2,500 y of the domestication process.
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RBINS Staff Publications 2019
The Quercy Phosphorites Formation in France is world famous for its Eocene to Miocene faunas, especially those from the upper Eocene to lower Oligocene, the richest of all. The latter particularly helped to understand the ‘Grande Coupure’, a dramatic faunal turnover event that occurred in Europe during the Eocene-Oligocene transition. Fossils from the Quercy Phosphorites were excavated from the middle 19th century until the early 20th century in a series of sites and became subsequently dispersed over several research institutions, while often losing the temporal and geographical information in the process. In this contribution, we provide an overview and reassess the taxonomy of these barely known collections housed in three Belgian institutions: the Université de Liège, KU Leuven, and the Royal Belgian Institute of Natural Sciences. We focus our efforts on the carnivorous mammals (Hyaenodonta and Carnivoramorpha) and assess the stratigraphic intervals covered by each collection. These fossils are derived from upper Eocene (Priabonian), lower Oligocene (Rupelian), and upper Oligocene (Chattian) deposits in the Quercy area. The richness of the three collections (e.g., the presence of numerous postcranial elements in the Liège collection), the presence of types and figured specimens in the Leuven collection, and some identified localities in the RBINS collection make these collections of great interest for further studies on systematics and the evolution of mammals around the ‘Grande Coupure’.
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RBINS Staff Publications 2021
