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Additional vertebral material of Thaumastophis (Serpentes: Caenophidia) from the early Eocene of India provides new insights on the early diversification of colubroidean snakes: The Ypresian Cambay Shale Formation at Vastan, Mangrol, and Tadkeshwar lignite mines in Gujarat, western India, has yielded a rich vertebrate fauna including madtsoiid, palaeophiid, booid, and colubroideanlike snakes. The latter are particularly abundant, but their systematic affinities are difficult to resolve. Here we describe new specimens of the colubroidean-like snake Thaumastophis missiaeni, including anterior, middle, and posterior trunk vertebrae, as well as caudal vertebrae. The combination of primitive and derived caenophidian and colubroidean vertebral characters confirms Thaumastophis as the earliest known stem-colubriform snake while Procerophis, from the same beds, is more derived and considered to represent a crown-Colubriformes. Additionally, Thaumastophis shares with Renenutet enmerwer from the late Eocene of Egypt a unique combination of vertebral characters that suggests an exchange with North Africa was possible along the southern margin of the Neotethys. We erect the new family Thaumastophiidae for Thaumastophis and Renenutet on the basis of their shared derived vertebral morphology.
Located in Library / RBINS Staff Publications 2021
Presence of the large aquatic snake Palaeophis africanus in the middle Eocene marine margin of the Congo Basin, Cabinda, Angola: Ten isolated snake vertebrae from Landana and Sassa-Zao, Cabinda Exclave, Angola, present a ‘‘primitive” grade morphology with a weak lateral compression and do not belong to Palaeophis aff. typhaeus as originally referred to. They well belong to a single taxon and are here attributed to Palaeophis africanus for which the intracolumnar variation is described and illustrated. This species is Lutetian (middle Eocene) in age and originates from a marine coastal environment confirming again the aquatic capabilities of palaeophiid snakes. It represents the third largest species of Palaeophis with P. colossaeus and P. maghrebianus to which it is closely related in our tentative phylogenetic analysis, indicating that these three taxa could belong to an African clade. This study also contributes to the debate on the existence of primitive and advanced grades among palaeophiid snakes. Palaeophis presents laterally compressed anterior trunk vertebrae that could have been often erroneously considered as representing advanced grade species and potential parataxonomy.
Located in Library / RBINS Staff Publications 2021
A new basal raoellid artiodactyl (Mammalia) from the middle Eocene Subathu Group of Rajouri District, Jammu and Kashmir, northwest Himalaya, India: A new artiodactyl of moderate size, Rajouria gunnelli nov. gen., nov. sp., is described on the basis of several dentaries, maxillae and isolated teeth from the middle Eocene Subathu Group of the Kalakot area, Rajouri District, Jammu and Kashmir, India. Despite its general resemblance with the family Dichobunidae by the retention of a paraconid on m1-2 and a simple P4 where endocristids do not form an anterior loph, this taxon shares with Raoellidae two unambiguous characters: the presence of a hypoconid on p4, and an asymmetrical P4. The phylogenetic position of the new taxon within the Cetacea–Raoellidae clade is strongly supported by seven non ambiguous synapomorphies, among which a cristid obliqua on lower molars anteriorly pointing towards the postectoprotocristid, and a P3 with only two roots. The presence of a new basal raoellid in the middle Eocene Subathu Group sheds new light on the phylogeny and paleobiogeography of raoellid artiodactyls.
Located in Library / RBINS Staff Publications 2021
Protected yet unmanaged: insights into the ecological status of conservation priority stony reefs in Belgian waters based on the integrative use of remote sensing technologies: Stony reefs are ecologically important, providing irreplaceable ecosystem services. These fragile environments are recognised as conservation priorities by all relevant global and European policies. Bottom-contacting ﬁ sheries are an important source of anthropogenic disturbance to the sea ﬂ oor ’ s physical and ecological integrity having immediate and destructive consequences on stony reefs and compromising ecological functions. This study, aimed to assess the ecological status (community composition and functions) of two stony reef areas -Northwest and Hinder Banks study sites -in Belgian waters using multiple remote sensing tools. Insights on the study sites ’ geomorphological context and ﬁ shing patterns were gained using echo-sounding and publicly available satellite data. Video-based benthic community data were assessed against the exposure to ﬁ shing pressure using a trait-based approach linked to the biotas ’ resistance and recovery potential. In the Northwest study site, between 2019 and 2022 there was a signi ﬁ cant decline in the abundance of benthic species classi ﬁ ed with low resistance and recovery potential to trawling. Conversely, there was a notable increase in species with moderate scores. During the same period, this site experienced an eight-fold increase in ﬁ shing effort and the hydroacoustic data revealed the presence of several trawl-marks in 2022. Similar changes in benthic communities were observed in the Hinder Banks too. Here, the abundance of species with low resistance and recovery potential was signi ﬁ cantly lower in locations that were geomorphologically exposed to trawling compared to sheltered ones. Exposed locations had a higher abundance of opportunistic species, with moderate to high scores. The presence of several trawl marks on the sea ﬂ oor was observed in the exposed locations, corresponding to ﬁ shing hotspots identi ﬁ ed in the satellite data. Trawling activities marginally impacted richness and total abundance, but negatively altered benthic functional composition. The ﬁ ndings of this study provide scienti ﬁ c evidence of the detrimental impact of bottom-contacting ﬁ sheries on conservation priority biotopes and argues against the coexistence of such activities with Marine Protected Areas. The results of our investigation are of interest to environmental managers for the adequate implementation of environmental legislation in the face of rapid and widespread anthropogenic changes.
Located in Library / RBINS Staff Publications 2023
SEADETECT: developing an automated detection system to reduce whale-vessel collision risk: With the continuous intensification of marine traffic worldwide, whale-vessel collisions at sea (or “ship strikes”) have become one of the primary causes of mortality for cetaceans and a widely recognised cause of concern for human safety and economic losses. The Mediterranean Sea is a global hotspot for whale-vessel collisions, with one of the highest rates involving large cetaceans, especially the endangered fin whales (Balaenoptera physalus) and sperm whales (Physeter macrocephalus). Evidence indicates that both species are experiencing higher chances of a fatal collision than what predictions have estimated so far, with ship strikes being the main human-induced threat in the area. Regional and international organisations have stressed the need to address the issue by investigating the projected impacts of ship strikes on whale populations and by identifying possible mitigation measures to reduce chances of collision. Amongst the most popular and feasible options, there is the improvement of animal detection during navigation. Here, we present SEADETECT, a LIFE project that aims at developing an automated detection system to reduce vessel collision risk with marine mammals and unidentified floating objects (UFOs), combining state-of-the-art and novel technologies with existing approaches in the study of large whale ecology. This detection system consists of three elements; an automated onboard detection system composed of several sensors, a real- time passive acoustic monitoring (PAM) network at sea and a real-time detection-sharing and alert system (REPCET®). In this paper, we propose the development of a mitigation measure framework tailored for the issue of collision with fin and sperm whales in the north-western Mediterranean Sea, but that has the transferability features necessary for its application in other high-risk areas for ship strikes worldwide.
Located in Library / RBINS Staff Publications 2023
Interregional comparison of benthic ecosystem functioning: Community bioturbation potential in four regions along the NE Atlantic shelf: Located in Library / RBINS Staff Publications 2019
Investigating Infectious Organisms of Public Health Concern Associated with Wild Meat: Located in Library / RBINS Staff Publications 2023 OA
SARS-CoV-2 Surveillance between 2020 and 2021 of All Mammalian Species in Two Flemish Zoos (Antwerp Zoo and Planckendael Zoo): Located in Library / RBINS Staff Publications 2023 OA
Assessment of PRISMA water reflectance using autonomous hyperspectral radiometry: Hyperspectral remote sensing reflectance (Rrs) derived from PRISMA in the visible and infrared range was evaluated for two inland and coastal water sites using above-water in situ reflectance measurements from autonomous hyper- and multispectral radiometer systems. We compared the Level 2D (L2D) surface reflectance, a standard product distributed by the Italian Space Agency (ASI), as well as outputs from ACOLITE/DSF, now adapted for processing of PRISMA imagery. Near-coincident Sentinel-3 OLCI (S3/OLCI) observations were also compared as it is a frequent data source for inland and coastal water remote sensing applications, with a strong calibration and validation record. In situ measurements from two optically diverse sites in Italy, equipped with fixed autonomous hyperspectral radiometer systems, were used: the REmote Sensing for Trasimeno lake Observatory (RESTO), positioned in a shallow and turbid lake in Central Italy, and the Acqua Alta Oceanographic Tower (AAOT), located 15 km offshore from the lagoon of Venice in the Adriatic Sea, which is characterised by clear to moderately turbid waters. 20 PRISMA images were available for the match-up analysis across both sites. Good performance of L2D was found for RESTO, with the lowest relative (Mean Absolute Percentage Difference, MAPD 25\%) and absolute errors (Bias 0.002) in the bands between 500 and 680 nm, with similar performance for ACOLITE. The lowest median and interquartile ranges of spectral angle (SA 8°) denoted a more similar shape to the RESTO in situ data, indicating pigment absorption retrievals should be possible. ACOLITE showed better statistical performance at AAOT compared to L2D, providing R2 0.5, Bias 0.0015 and MAPD 35\%, in the range between 470 and 580 nm, i.e. in the spectral range with highest reflectances. The addition of a SWIR based sun-glint correction to the default atmospheric correction implemented in ACOLITE further improved performance at AAOT, with lower uncertainties and closer spectral similarity to the in situ measurements, suggesting that ACOLITE with glint correction was able to best reproduce the spectral shape of in situ data at AAOT. We found good results for PRISMA Rrs retrieval in our study sites, and hence demonstrated the use of PRISMA for aquatic ecosystem mapping. Further studies are needed to analyse performance in other water bodies, over a wider range of optical properties.
Located in Library / RBINS Staff Publications 2022
QWIP: A Quantitative Metric for Quality Control of Aquatic Reflectance Spectral Shape Using the Apparent Visible Wavelength: The colors of the ocean and inland waters span clear blue to turbid brown, and the corresponding spectral shapes of the water-leaving signal are diverse depending on the various types and concentrations of phytoplankton, sediment, detritus and colored dissolved organic matter. Here we present a simple metric developed from a global dataset spanning blue, green and brown water types to assess the quality of a measured or derived aquatic spectrum. The Quality Water Index Polynomial (QWIP) is founded on the Apparent Visible Wavelength (AVW), a one-dimensional geophysical metric of color that is inherently correlated to spectral shape calculated as a weighted harmonic mean across visible wavelengths. The QWIP represents a polynomial relationship between the hyperspectral AVW and a Normalized Difference Index (NDI) using red and green wavelengths. The QWIP score represents the difference between a spectrum’s AVW and NDI and the QWIP polynomial. The approach is tested extensively with both raw and quality controlled field data to identify spectra that fall outside the general trends observed in aquatic optics. For example, QWIP scores less than or greater than 0.2 would fail an initial screening and be subject to additional quality control. Common outliers tend to have spectral features related to: 1) incorrect removal of surface reflected skylight or 2) optically shallow water. The approach was applied to hyperspectral imagery from the Hyperspectral Imager for the Coastal Ocean (HICO), as well as to multispectral imagery from the Visual Infrared Imaging Radiometer Suite (VIIRS) using sensor-specific extrapolations to approximate AVW. This simple approach can be rapidly implemented in ocean color processing chains to provide a level of uncertainty about a measured or retrieved spectrum and flag questionable or unusual spectra for further analysis.
Located in Library / RBINS Staff Publications 2022

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